Gene Pput_4854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4854 
Symbol 
ID5195226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5444956 
End bp5445534 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content56% 
IMG OID640589339 
Producthypothetical protein 
Protein accessionYP_001270158 
Protein GI148550056 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.393068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0523451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA AGACTTTTGC CGCTCTGGCG CTCGGTACCG CTCTGCTCTC TGCTGGCCAG 
GCCATGGCTG CCGAGTACAA GATCGACAAG GAAGGCCAGC ACGCGTTCGT TGACTGGAAA
ATCAGCCACC TGGGCTACAG CTTCATCCAC GGTACTTTCA AGGATTTCGA CGGCAACTTC
AGCTGGGACA GTGCCAAGCC TGAAGCCAGC AAGATTAGCG TCGACTTGAA AACTGCCAGC
CTGTGGTCGA ATCACGCCGA GCGTGACAAG CACATCGCCA GCGCCGACTT CCTCGACGTG
AAGAAGTACC CGGACGCTAA ATTCGTTTCC ACCAGCGTCA AGTCGACTGG CGACAAGACT
GCTGACGTGA CTGGCGACCT GACCATGCAC GGTGTCACCA AACCGGTGAC GTTCAAAGCT
ACCTTCAACG GTGAAGGCAA GGACCCATGG GGTGGTGAGC GCGCAGGCTT CAACGCCACC
ACAACGCTGA ACCTGAACGA CTTCGGCATC AAAGGCCCAG GCGCTACTTC GCAGACCCTG
GACCTGGATA TCAGTGTTGA AGGTGTGAAG CAGAAGTAA
 
Protein sequence
MLKKTFAALA LGTALLSAGQ AMAAEYKIDK EGQHAFVDWK ISHLGYSFIH GTFKDFDGNF 
SWDSAKPEAS KISVDLKTAS LWSNHAERDK HIASADFLDV KKYPDAKFVS TSVKSTGDKT
ADVTGDLTMH GVTKPVTFKA TFNGEGKDPW GGERAGFNAT TTLNLNDFGI KGPGATSQTL
DLDISVEGVK QK