Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4854 |
Symbol | |
ID | 5195226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5444956 |
End bp | 5445534 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640589339 |
Product | hypothetical protein |
Protein accession | YP_001270158 |
Protein GI | 148550056 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.393068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0523451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAAAA AGACTTTTGC CGCTCTGGCG CTCGGTACCG CTCTGCTCTC TGCTGGCCAG GCCATGGCTG CCGAGTACAA GATCGACAAG GAAGGCCAGC ACGCGTTCGT TGACTGGAAA ATCAGCCACC TGGGCTACAG CTTCATCCAC GGTACTTTCA AGGATTTCGA CGGCAACTTC AGCTGGGACA GTGCCAAGCC TGAAGCCAGC AAGATTAGCG TCGACTTGAA AACTGCCAGC CTGTGGTCGA ATCACGCCGA GCGTGACAAG CACATCGCCA GCGCCGACTT CCTCGACGTG AAGAAGTACC CGGACGCTAA ATTCGTTTCC ACCAGCGTCA AGTCGACTGG CGACAAGACT GCTGACGTGA CTGGCGACCT GACCATGCAC GGTGTCACCA AACCGGTGAC GTTCAAAGCT ACCTTCAACG GTGAAGGCAA GGACCCATGG GGTGGTGAGC GCGCAGGCTT CAACGCCACC ACAACGCTGA ACCTGAACGA CTTCGGCATC AAAGGCCCAG GCGCTACTTC GCAGACCCTG GACCTGGATA TCAGTGTTGA AGGTGTGAAG CAGAAGTAA
|
Protein sequence | MLKKTFAALA LGTALLSAGQ AMAAEYKIDK EGQHAFVDWK ISHLGYSFIH GTFKDFDGNF SWDSAKPEAS KISVDLKTAS LWSNHAERDK HIASADFLDV KKYPDAKFVS TSVKSTGDKT ADVTGDLTMH GVTKPVTFKA TFNGEGKDPW GGERAGFNAT TTLNLNDFGI KGPGATSQTL DLDISVEGVK QK
|
| |