| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4784 |
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| Symbol | psd |
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| ID | 5195054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5358313 |
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| End bp | 5359176 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589269 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001270088 |
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| Protein GI | 148549986 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC GTCTGTTCAT CATCAGCCAG TACCTGCTGC CGCACCACCT GCTGTCGCGG
CTGGCCGGCT GCATCGCCGA GTGCCGCGTG CGCTGGTTCA AGAACGCCTT CACCGCATGG
TTCGCCAAGC GCTACCAGGT GAACATGAGC GAGGCGCTGG TCGAAGACCT GAGCGCTTAC
GAGCACTTCA ATGCGTTCTT CACCCGCGCC TTGAAACCTG GTGCCCGTCC GCTGGACGAA
ACCCCGGGCG CCATCCTGTG CCCGGCCGAC GGTGCGGTCA GCCAGCTTGG CCCGATCGAG
CACGGTCGTA TCTTCCAGGC CAAAGGCCAC GGTTTCAGCG CGCAAGAGCT GCTGGGCGGT
GATCCGGCCA TGGCCGCGCC GTTCATGGGC GGCGAGTTTG CCACCATCTA CCTGTCGCCC
AAGGACTACC ACCGCGTGCA CATGCCGCTG GCCGGCACCC TGCGCGAAAT GGTCTATGTG
CCGGGCCGCC TGTTCTCGGT CAACCAGACC ACCGCAGAGA ATGTCCCCGA GCTGTTCGCT
CGCAACGAGC GCGTGGTCTG CCTGTTCGAT ACAGAGCGTG GGCCAATGGC TGTGGTACTG
GTCGGCGCGA TGATCGTCGC CTCGATCGAA ACGGTATGGG CCGGGCTGGT CACGCCGCCC
AAACGTGAGC TGAAGACCTT CCGCTACGAC GAAGCCAGCC GCACGCCGAT CCACCTGGAG
AAAGGTGCCG AACTAGGCCG CTTCAAGCTG GGTTCGACCG CCATCGTGCT GTTCGGGCCG
GAGCAGGTGA AGTGGGCTGA GAGCCTGGGT GCGGGTTCTG CAGTGCGCAT GGGGCAGCAG
CTGGCGGCGC CTGTGCAGGC TTGA
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| Protein sequence | MKSRLFIISQ YLLPHHLLSR LAGCIAECRV RWFKNAFTAW FAKRYQVNMS EALVEDLSAY
EHFNAFFTRA LKPGARPLDE TPGAILCPAD GAVSQLGPIE HGRIFQAKGH GFSAQELLGG
DPAMAAPFMG GEFATIYLSP KDYHRVHMPL AGTLREMVYV PGRLFSVNQT TAENVPELFA
RNERVVCLFD TERGPMAVVL VGAMIVASIE TVWAGLVTPP KRELKTFRYD EASRTPIHLE
KGAELGRFKL GSTAIVLFGP EQVKWAESLG AGSAVRMGQQ LAAPVQA
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