Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4746 |
Symbol | |
ID | 5191695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5314137 |
End bp | 5315342 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640589229 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_001270050 |
Protein GI | 148549948 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000123757 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAA GCGCATTCGC CGAGCGCATC GTGCACAACT TGCTCGACAC CGACTTCTAC AAACTCACCA TGATGCAGGG AGTGCTGCAC AACTACCCGG ACGCCGACGT CGAATGGGAA TTCCGCTGCC GCAACGGTGA GGATCTGCGC CCCTACCTCG GCGAAATTCG CAATCAGCTC GAACGGCTTG GCGACCTCAC CCTGGACGAT GGCCAGCTGG CCTTCCTCGA ACGCATCAGC TTCCTCAAGC CCGACTTTTT ACGCTTTCTG CGCCTGTTCC GCTTCAACCT GCGTTACGTG CACGTCGGCA TCGAAAATGA TCAGCTGTTC CTGCGCCTGA AAGGTCCGTG GCTGCATGTG ATCCTGTTCG AAGTGCCGCT GCTGGCCATC ATCAGTGAAG TACGCAACCG CAATCTGCAC CCGCACATGC GCCTGGCCGA GGCGCGGGAT CAGTTGTACC GCAAGTTTGA CTGGCTGCGT GCACATGCCA GCGACGACGA GCTGGCCGAA CTGCAGGTGG CCGACTTCGG CACCCGCCGG CGCTTTTCCA GCCGCGTGCA GGAGGAAGTG GTAAGGGTGC TGCGCGACGA CTTCCCCGGC CGTTTTGTCG GCACCAGCAA CGTCGACCTG GCATGGAAAC TGGATATCAA ACCACTGGGC ACCATGGCCC ACGAGTGGAT CATGGCCCAC CAGCAGCTCG GCCCCCGGCT GATCGACAGC CAGATCGCCG CGCTGGACTG CTGGGTACGC GAGTACCGCG GCTTGCTCGG CATCGCCCTG ACCGACTGCA TCACCATGGA TGCCTTCCTC GGCGATTTCG ACCTGTACTT CGCCAAGCTG TTCGACGGCC TGCGCCATGA TTCGGGCGAG CCGGTAGCCT GGGCGGAAAA GGCCATTGCC CATTACCAGA AACTGGGTAT CGACCCGATG ACCAAGACCT TGGTGTTTTC CGACGGCCTC AACCTGACCC GCTCGCTGGA AATTTTCCGC GCCCTGCGCG GCCGCATCAA CGTCAGCTTT GGCATTGGCA CCAACCTGAC CTGCGACATC CCTGGTGTGG CACCCATGAG CATCGTGCTT AAAATGACCG ACTGCAACGG CGCGCCGGTG GCCAAGATCT CTGACGAAGC CGCCAAGACC CAGTGCCGCG ACGAGAACTT CGTCGCCTAC ATGCGTCACG TATTCAAAGT CCCCAGCAAG GAGTAA
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Protein sequence | MSESAFAERI VHNLLDTDFY KLTMMQGVLH NYPDADVEWE FRCRNGEDLR PYLGEIRNQL ERLGDLTLDD GQLAFLERIS FLKPDFLRFL RLFRFNLRYV HVGIENDQLF LRLKGPWLHV ILFEVPLLAI ISEVRNRNLH PHMRLAEARD QLYRKFDWLR AHASDDELAE LQVADFGTRR RFSSRVQEEV VRVLRDDFPG RFVGTSNVDL AWKLDIKPLG TMAHEWIMAH QQLGPRLIDS QIAALDCWVR EYRGLLGIAL TDCITMDAFL GDFDLYFAKL FDGLRHDSGE PVAWAEKAIA HYQKLGIDPM TKTLVFSDGL NLTRSLEIFR ALRGRINVSF GIGTNLTCDI PGVAPMSIVL KMTDCNGAPV AKISDEAAKT QCRDENFVAY MRHVFKVPSK E
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