| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4745 |
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| Symbol | |
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| ID | 5191209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5312488 |
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| End bp | 5313624 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589228 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001270049 |
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| Protein GI | 148549947 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000119526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGA CGTTTTACAA GAAAGGTTTC CTGGCTCTGG CCGTAGCTAC GGCGCTGGGT
GTTTCTTCGT ATGTTCAGGC CGACGTCAAG ATCGGTGTAG CGGGCCCAAT GACCGGTGCC
AACGCAGCGT TTGGCGAGCA GTACATGAAA GGTGCGCAGG CAGCGGCCGA CAAGATCAAC
GCCGCCGGTG GCGTGAATGG CGAGAAAATC GTCCTGGTCA AAGGCGATGA CGCCTGTGAG
CCGAAGCAAG CCGTGGCCGT GGCCAACCGA CTGGTCGACC AGGACAAGGT GATCGGCGTA
GTGGGCCACT TCTGTTCCTC CAACACGATC CCGGCGTCCG AGGTATATGA CGAGGCGGGC
GTGATCGCCA TCACCCCAGG CTCCACCAAC CCACAGGTCA CGGAGCGCGG CCTGAGCGCC
ATGTTCCGCA TGTGCGGCCG TGACGACCAG CAGGGTATCG TCGCTGGCGA CTACATCGTC
GACGTGCTCA AGGGCAAGAA GGTCGCGGTG TTGCACGACA AGGACACCTA CGGTCAGGGC
CTGGCCGACG CGACCAAGGC GCAGCTGGAA AAACGCGGCG TGAAGCCTGT GCTGTACGAA
GGCCTGACCC GTGGCGAGAA AGACTTCAGC GCTGTGGTCA CCAAGATCCG CTCTACCGGT
GCCGACGTGG TCTATTTCGG CGGCCTGCAC CCGGAAGCCG GCCCGCTGGT ACGCCAGTTG
CGCGAGCAGG GCCTGAAGGA CGTCAAGTTC ATGTCCGATG ATGGCATCGT CACCGACGAA
CTGGTGTCTA CCGCCGGCGG CGCGCAATAC GTTGACGGCG TGTACATGAC CTTCGGTGCC
GACCCGCGCC TGCTGCCAGA CAGCAAGGCG GTGGTGGAGG AGTTCCGCAA GGCCGGCACC
GAACCTGAGG GCTACACCCT GTACGCCTAC GCTTCGCTGC AGGCTCTGGC TGCCGCGTTC
AATGGCGCGA AGTCGAACAA GGGCGAGGAC GCTGCCAAGT GGCTCAAGGC CAACCCGGTG
CAGACCGTCA TGGGTGAGAA GAAGTGGGAC AGCAAGGGCG ACCTGACCGT GTCCGACTAC
GTGGTCTACC AGTGGGACAA GACCGGTAAA TACCACCAGC TGGAAAAACA AAAATAA
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| Protein sequence | MSQTFYKKGF LALAVATALG VSSYVQADVK IGVAGPMTGA NAAFGEQYMK GAQAAADKIN
AAGGVNGEKI VLVKGDDACE PKQAVAVANR LVDQDKVIGV VGHFCSSNTI PASEVYDEAG
VIAITPGSTN PQVTERGLSA MFRMCGRDDQ QGIVAGDYIV DVLKGKKVAV LHDKDTYGQG
LADATKAQLE KRGVKPVLYE GLTRGEKDFS AVVTKIRSTG ADVVYFGGLH PEAGPLVRQL
REQGLKDVKF MSDDGIVTDE LVSTAGGAQY VDGVYMTFGA DPRLLPDSKA VVEEFRKAGT
EPEGYTLYAY ASLQALAAAF NGAKSNKGED AAKWLKANPV QTVMGEKKWD SKGDLTVSDY
VVYQWDKTGK YHQLEKQK
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