Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4742 |
Symbol | |
ID | 5192774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5309243 |
End bp | 5310118 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640589225 |
Product | ABC transporter related |
Protein accession | YP_001270046 |
Protein GI | 148549944 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00113438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000142974 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACG ATATCATTCT CTCGGTCGAC AACCTGATGA TGCAGTTCGG TGGCATCAAG GCGCTCAGCG ATGTCAGCCT GAAGGTCCGG CGCAACCAGA TCTTCGCCCT GATCGGCCCC AATGGCGCCG GCAAGACTAC GGTGTTCAAC TGCCTGACCG GCTTTTACAA GGCCAGTGGC GGGCGCATCG AGCTGAACGT GCGCGGCAGC CATACCAACG TGATCCAGCT GCTCGGTGAG CGCTTCCAGC CGGCCGACTT CGTTTCGCCT GCGCGCTTTG CCAACCGCAT GTACTACAAG ATGTTCGGCG GTACCCATTT GGTCAACCGC GCCGGCCTGG CACGCACCTT CCAGAACATC CGGCTGTTCA AGGAAATGTC GGTGGTGGAG AACCTGCTGG TGGCGCAGCA CATGTGGGTC AACCGAAACC TGCTGGCAGG TGTGTTCAAC ACCAAGGCCT ATCGCAAGGC GGAGAGCGAT GCGCTGGACC ACGCCTTCTA CTGGCTGGAA GTGGTCGACC TGGTCGATTG TGCCAACCGC TTGGCCGGCG AACTGTCGTA CGGCCAGCAG CGCCGCCTGG AAATTGCCCG GGCCATGTGC ACGCGGCCGA AGATCATCTG CCTGGACGAA CCGGCGGCGG GCCTGAACCC GCAGGAAACC GAGGCACTCA GCCGCATGAT CCGTGTGCTG CGTGACGAGC ACGACATCAC TGTGGTGCTG ATCGAGCACG ACATGGGCAT GGTCATGAGC ATCTCCGACC ATATCGTGGT GCTGGACCAC GGCAATGTGA TTGCCGAAGG TGCGCCGCAG GACATCCGCC ACAACCCGAC GGTGATTGCC GCCTACCTGG GTGCAGACGA AGAGGAACTG GTATGA
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Protein sequence | MSDDIILSVD NLMMQFGGIK ALSDVSLKVR RNQIFALIGP NGAGKTTVFN CLTGFYKASG GRIELNVRGS HTNVIQLLGE RFQPADFVSP ARFANRMYYK MFGGTHLVNR AGLARTFQNI RLFKEMSVVE NLLVAQHMWV NRNLLAGVFN TKAYRKAESD ALDHAFYWLE VVDLVDCANR LAGELSYGQQ RRLEIARAMC TRPKIICLDE PAAGLNPQET EALSRMIRVL RDEHDITVVL IEHDMGMVMS ISDHIVVLDH GNVIAEGAPQ DIRHNPTVIA AYLGADEEEL V
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