| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4719 |
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| Symbol | |
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| ID | 5195576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5287041 |
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| End bp | 5288306 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589202 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001270023 |
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| Protein GI | 148549921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.14369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0383938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC GCAGTCTGAT CAAGGCCCTT ACCCTCAGCG CATCGATTGC GGCGATGGGC
CTGAGCTGGA GTATCCAGGC CGCCGAGACC ATCAAGGTCG GTATCCTGCA TTCGCTTTCC
GGGACCATGG CCATTTCCGA GACATCGCTC AAGGACATGG CGCTGATGAC CATCGAGCAG
ATCAACGCCA AGGGTGGCGT GAACGGCAAG ATGCTGGAAC CGGTGGTGGT CGACCCGGCG
TCCAACTGGC CGCTGTTCGC TGAAAAGAGC CGCCAACTGC TGACCCAAGA CAAAGTGGCC
GTGGTGTTCG GCTGCTGGAC CTCCGTGTCG CGCAAGTCCG TTCTGCCGGT GTTCGAAGAA
CTCAACGGCC TGCTGTTCTA CCCGGTGCAG TATGAGGGCG AAGAGATGTC GCCGAACGTG
TTCTACACGG GCGCCGCCCC GAACCAGCAG GCCATCCCGG CCGTGGAATA CCTGATGAGC
GAGGACGGCG GCAGCGCCAA GCGCTTCTTC CTGTTGGGCA CCGATTACGT CTACCCGCGC
ACCACCAACA AGATCCTGCG CGCATTCCTG CACAGCAAAG GCGTGGCCGA CAAGGACATC
GAAGAGGTTT ACACGCCCTT TGGCCACGCT GATTACCAGA CCATTGTCGC CAGCATCAAA
AAGTTCTCCG CCGGCGGCAA GACCGCTGTC ATATCCACAG TCAACGGTGA CTCCAACGTG
CCGTTCTACA AGGAACTGGC CAACCAGGGC CTGAAGGCCA CCGACGTGCC GGTGGTGGCC
TTCTCGGTGG GCGAGGAGGA ACTGCGCGGC ATCGACACCA AACCGCTGGT GGGCCACCTG
GCGGCATGGA ACTACTTCGA ATCGGTGGAT AACCCGGTCA ACCAGAAATT CGTCGCCGAC
TGGAAGGCCT ACGCCAAGGC CAAGGGCCTG CCGGGTGCCG ACAAGGCCGT GACCAACGAC
CCCATGGAAG CCACCTACGT GGGCATCCAC ATGTGGGCCC AGGCTGTCGA GAAAGCCAAG
TCCACTGACG TTGACAAGGT CCGCGAAGCA CTGGCCGGGC AGAGCTTCGA GGCGCCGTCG
GGCTTCACCC TGACCATGGA CAAGACCAAC CACCACCTGC ACAAGCCGGT GATGATCGGC
GAGATTCAGG ATGACGGGCA GTTCAGCGTG GTGTGGGAAA CCGAGCAGCC ACTGCGGGCG
CAGCCATGGA GCCCGTTCAT TCCGGGCAAT GAGAAGCGGC CAGATTACGC CGTGAAAGGT
AACTGA
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| Protein sequence | MKRRSLIKAL TLSASIAAMG LSWSIQAAET IKVGILHSLS GTMAISETSL KDMALMTIEQ
INAKGGVNGK MLEPVVVDPA SNWPLFAEKS RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLMS EDGGSAKRFF LLGTDYVYPR
TTNKILRAFL HSKGVADKDI EEVYTPFGHA DYQTIVASIK KFSAGGKTAV ISTVNGDSNV
PFYKELANQG LKATDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFESVD NPVNQKFVAD
WKAYAKAKGL PGADKAVTND PMEATYVGIH MWAQAVEKAK STDVDKVREA LAGQSFEAPS
GFTLTMDKTN HHLHKPVMIG EIQDDGQFSV VWETEQPLRA QPWSPFIPGN EKRPDYAVKG
N
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