Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4717 |
Symbol | |
ID | 5193242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5283749 |
End bp | 5285116 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589200 |
Product | peptidase |
Protein accession | YP_001270021 |
Protein GI | 148549919 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.292427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0740605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAGGAA CACGCGTCTC TTTCTACAAC CTGGCCTGGC GTTGGCATTT CTATGCGGGG CTGTTCGTGG CCCCGTTCAT GATCCTGTTG GCAATCACCG GGATCATCTA CTTGTTCAAG CCCCAGCTCG ACCCGCTGCT GTACCGCGAC CTGATGGTGG TCGAGGCCGG CCAGCACCGG CAGGGCGCAG ACACGATGCT GGCTGAAGTG CGCCAAGCCT ACCCAAAGGG CCACATCGCC CAGTACTTGC CGCCACTGAA CGCCGCGCGC AGTGCGCAGT TCGTGGTGCA TAACGGCGGG CGCGAACTGA ACGTGTTCGT CGACCCATAC AGCGGCAAGG TCCTCGGCGA ACAGGACGGC AAGCAGAACC TGCAGGCCAT CGCCCGCGCC CTGCATGGCG AGCTGATGGT CGGCACGGTC GGTGACCGGC TGGTGGAACT GGCGGCGGGC TGGGGCATCG TGCTGGTGGT ATCGGGCCTG TACCTGTGGT GGCCGCGCGG GCGCAGTGGC GCTGGCGTGC TTTGGCCGCG GCTGACGGCA CGCGGCCGGC TGCTCTGGCG TGACCTGCAC GCGGTAACCG GTTTCTGGGG TTCGGCCTTG CTGTTGTTGA TGCTGATCAG CGGCATGACC TGGACCGGCT TGTGGGGCAA GCAGTACGCT GATTTGTGGA ACCGCTTCCC GGCAGCCATG TGGAACGACG TGCCCAAGTC GGACCAGCAG GCGCGTGAGC TGAACAGCGC ACACCGCCAG ACCGTACCCT GGGCCATGGA AAACACGCCG ATGCCACAGT CCGGTGCACA CGCCGAGCAC GGCGGGCACC ACATGATGTC GGACCTGCCC GCAGCGCCCC AGGTGAGCGT GCAACAGGTC GAAGACATTG CCACTTCGCG CCAGGTCGAG CCGGGCTACA GCATTACCCT GCCCACGACT GCCGACGGGG TGTTCACCAT TGCCGTGTTC GCCGACGACC CGCGCAACGA CGCCACCCTG CATGTCGACC AATACACCGG CAAGGTTCTG GCCGATGTGC GCTGGCAGGA CTACAGCCCG GTTGCCCGCG CCACCGAGCT GGGCGTGATG CTGCACGAAG GCAAGATGTT CGGGGCGCTG AACCAGATCA TCATCCTGCT GGTGTGCCTG ATGATCCTGC TGGGTTCGAT GAGCGGGCTG GTGATGTGGT GGAAGCGCCG GCCGGACGGC GGCCTGGGCG TACCGCCTTT GCGTCATGAC CTGCCACGCT GGAAGGCGGC GGTGGCAGTG ATGCTGGTGC TGGGGGTGAT GTTCCCGCTG GTAGGGGTGT CGATGGTGGG GATGTGGGGG GTGGATAGTT TGGTGGTGAG GCGCCGCAGG GTCTTGGCCA GCGCTTGA
|
Protein sequence | MRGTRVSFYN LAWRWHFYAG LFVAPFMILL AITGIIYLFK PQLDPLLYRD LMVVEAGQHR QGADTMLAEV RQAYPKGHIA QYLPPLNAAR SAQFVVHNGG RELNVFVDPY SGKVLGEQDG KQNLQAIARA LHGELMVGTV GDRLVELAAG WGIVLVVSGL YLWWPRGRSG AGVLWPRLTA RGRLLWRDLH AVTGFWGSAL LLLMLISGMT WTGLWGKQYA DLWNRFPAAM WNDVPKSDQQ ARELNSAHRQ TVPWAMENTP MPQSGAHAEH GGHHMMSDLP AAPQVSVQQV EDIATSRQVE PGYSITLPTT ADGVFTIAVF ADDPRNDATL HVDQYTGKVL ADVRWQDYSP VARATELGVM LHEGKMFGAL NQIIILLVCL MILLGSMSGL VMWWKRRPDG GLGVPPLRHD LPRWKAAVAV MLVLGVMFPL VGVSMVGMWG VDSLVVRRRR VLASA
|
| |