| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4694 |
|---|
| Symbol | |
|---|
| ID | 5191710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5259098 |
|---|
| End bp | 5260453 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640589177 |
|---|
| Product | Zinc finger-domain-containing protein |
|---|
| Protein accession | YP_001269998 |
|---|
| Protein GI | 148549896 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.725918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GTTTCGTCAC CCAGTGCCCG CATTGCCAGA CCAGCTTTCG CGTCACCCAC
CACCAGTTGG GCGTGGCGCG TGGCGTGGTG CGCTGCGGTC ACTGCCTGCA GGTATTCAAT
GCCGCCAAGC AGCTGCTGGA GCAAAACCGC GCCGCTACCA CCAGCGCCCC CGTGGTGCCG
GCACCGGTAC CTCCAGCGCC TGCCGCGCCG CTGGCCGAGC CGGCGCAAGA GCCCGCCGAC
AGCGTACGCG GCACCCCTCC TGACCAGGAC TGGGCGCTGA CTGCCCAGGC GCTGGACGAG
CTCGACCTCG ACAAGGAACT GGAGCGCCTG GAGCGTCGCG GCCAACCGGC CCCGGCCCAC
CCGGCCAGCA AGGATGAGAA GCTGCAGGCA CGGCGCGATG AACTTCACCC GGACGAACAC
GCAGAAGACC TTTTCGGTAC GGCTACCGAT GAGCCCTACG CGCCGCAGGA ACCGGCAGAG
CCTACCCCGG TGCTACTGGA ACCGGAACCT TTGGAGCTGG ACCTGGAGCC TGCCCCCGGC
GAGCGTACCG AGCCTACCCT GGGCAGCAAC CTTGACCTGG ACATCGATGG CGAGCCGCCT
GTGCACCGAG CGGCCGAACG CGATGACCAG CCCGCATTCA GCGAACCGCT GCGCATCAGC
GATGACGAAA CCCCGGAAAA AGGCCTGAGC GCCCGCGACG ACGAACCACT GGCGCTGCGC
CTGTCGGCGC ACGACGACGA GCCCGTCGAG CCACTGCCCG GAGAGCGCCT GGAACCAGGC
TTTGCTGGCA AGCCCGAGCG CCCCTCGCGC AAGGAGCCGC TGGTCGATGT GGTCGATGAC
CCGCTGCAGC TAGGCTGGGA AAAACCCGCA CCCAACTGGG GCAAGCGCCT GCTGTGGGGC
TTTCTGACCT TGCTGGCTGC CGGCCTGCTG GCGTTCCAGT ACGTGTGGTT CCATTTCGAC
GAAATGGCCC GACAGGACCA GTATCGGCCG ATTTTCCAGC AGATCTGCCC GATGATCGGT
TGCCAGGTGC CTACCCGCGT CGATATTGCA CGCATCAAGA GCAGCAATCT GGTGGTGCGC
AGCCACCCGG ACTTCAAGGG CGCACTCATT GTCGACGCGA TCATCTACAA CCGCGCACCG
TTCGCCCAGC CGTTCCCATT GCTGGAGCTG CGCTTCGCCG ACCTCAATGG CCAACTGATC
GCCAGCCGTC GCTTCAAGCC CAGCGAGTAC CTGTCGGGGG AACTGGCAGG GCGTGGCGAA
ATGCCCAGCC AGACGCCAAT CCACATTGCC CTGGACATCC TCGACCCTGG GCCGAAGGCC
GTGAATTACA GCCTGAGCTT CCGTTCGCCG GAGTAG
|
|---|
| Protein sequence | MTDSFVTQCP HCQTSFRVTH HQLGVARGVV RCGHCLQVFN AAKQLLEQNR AATTSAPVVP
APVPPAPAAP LAEPAQEPAD SVRGTPPDQD WALTAQALDE LDLDKELERL ERRGQPAPAH
PASKDEKLQA RRDELHPDEH AEDLFGTATD EPYAPQEPAE PTPVLLEPEP LELDLEPAPG
ERTEPTLGSN LDLDIDGEPP VHRAAERDDQ PAFSEPLRIS DDETPEKGLS ARDDEPLALR
LSAHDDEPVE PLPGERLEPG FAGKPERPSR KEPLVDVVDD PLQLGWEKPA PNWGKRLLWG
FLTLLAAGLL AFQYVWFHFD EMARQDQYRP IFQQICPMIG CQVPTRVDIA RIKSSNLVVR
SHPDFKGALI VDAIIYNRAP FAQPFPLLEL RFADLNGQLI ASRRFKPSEY LSGELAGRGE
MPSQTPIHIA LDILDPGPKA VNYSLSFRSP E
|
|---|
| |