Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4680 |
Symbol | |
ID | 5193868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5246407 |
End bp | 5247417 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589163 |
Product | lytic murein transglycosylase B |
Protein accession | YP_001269984 |
Protein GI | 148549882 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAG TGCGTAACTG GGCTGCCCGT TGTGCGCCTT GGATCGGTGC GGTGGGCCTG TTCGGCGCTG TACAGCTGGC CCATGCCGGC GAATACGACG GCTCGCCCCA GGTAGCCGCG TTCGTTGGCG AAATGAGCCG CGACTATGGT TTTGCGCCTG AGCAACTGGT GGGTGTGTTC CGTGAGGTAC AGCGCAAGCA GTCGATCCTC GACGCCATAT CGCGCCCGGC CGAGCGGGTC AAACCGTGGA AGGACTATCG GCCGATGTTC ATCACCGATG CACGTATCGC TCGCGGTGTG GATTTCTGGC GTCAGCACGA GGCTGTATTG GCACGTGCCG AGCAGGAGTA CGGCGTACCT GCGCAGTACA TTGTCGCAAT CATCGGCGTG GAAACCTTTT TTGGCCGCAA TACCGGCAAC TACCGGGTGA TCGACGCCCT GTCGACGCTG GGCTTCGACT ACCCGCCACG GGCCGAGTTC TTCCGCAAGG AGCTGCGTGA GTTCCTGCTG CTGGCCCGGG ATGAGCAGCT CGACCCCTTG ACGCTCAAGG GCTCGTACGC TGGCGCCATG GGGCTGCCGC AGTTCATGCC AAGCAGCTTC CGCAACTACG CGGTGGACTT CGACGGGGAC GGCCACATCA ATATCTGGAA CAACCCTGAC GATGCCATCG GCAGTGTGGC CAGCTACTTC AAGCGCCATG GCTGGGTGGC CGGCGAGGGT GTTGTCAGCC GCGCCTGGGT GGAAGGCATG CGTGCTGACG AAGGCCTGAC CACCGGCATC GAGCCGGTGA AAACGGTAGG GGAGTTGCGT ACGCTTGGCT GGTCGGTTCA TGATTCGCTG CGCGATGATC TGCCGGTTAC CGCCTTCCGT CTCGAGGGCG AGAGCGGCCC CGAGTACTGG ATGGGCCTGA AGAACTTCTA CGCGATCACT CGCTACAACC GCAGTGTGAT GTATGCCATG GCGGTACATC AGCTTGCGGA ACAGCTGGTT CAAGTACGGG GCGTCAAGTA A
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Protein sequence | MQAVRNWAAR CAPWIGAVGL FGAVQLAHAG EYDGSPQVAA FVGEMSRDYG FAPEQLVGVF REVQRKQSIL DAISRPAERV KPWKDYRPMF ITDARIARGV DFWRQHEAVL ARAEQEYGVP AQYIVAIIGV ETFFGRNTGN YRVIDALSTL GFDYPPRAEF FRKELREFLL LARDEQLDPL TLKGSYAGAM GLPQFMPSSF RNYAVDFDGD GHINIWNNPD DAIGSVASYF KRHGWVAGEG VVSRAWVEGM RADEGLTTGI EPVKTVGELR TLGWSVHDSL RDDLPVTAFR LEGESGPEYW MGLKNFYAIT RYNRSVMYAM AVHQLAEQLV QVRGVK
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