| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4673 |
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| Symbol | |
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| ID | 5194288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5239623 |
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| End bp | 5240939 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589156 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001269977 |
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| Protein GI | 148549875 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTCC GTCTTATCCC CCGCTGGGAA ACCCGCCAGC TGATCGCGGC CTCCAGCTTC
ATTCTGCTCG TGGCCTGTGC GGAAAAGCCC ACCGCCGCCG ACGCGCTGCC GCTGGCCCCT
GCCCAACCCA ATCCCGTGGT GACCGTGCCC GGCGCAACGC CCGACGTCAG CACTGACATC
CAGCCCCTGC AAACCTTCGC CCAATGGCAA GCAGGCTTCC GCGAGCAGGC ACTGCAAGCC
GGTATTTCGC CGAGCACCTT CGACCGTGCC TTCCTCGGTG TCACCCCCGA CCTGGACGTG
ATCAAGGCAG ACCGCAGCCA GCCAGAGTTC ACCCGCCCGG TGTGGGAATA CCTCGAAGGC
GCCCTGTCGC CCCTGCGTGT GCGCAACGGC AAGAAGCTGC TGGAGCAGAA CGCCGAGCTG
CTGACTCGCC TTGAGCAACG CTATGGCGTG GACCGCCAGG TGCTGGTCGC GGTGTGGGGC
ATGGAAAGCA ACTTCGGCCA GTTCCAGGGC AGCAAGTCGG TGATCCGCTC GCTGGCCACT
TTGGCCTATG AGGGCCGCCG CCCCCAGTTC GCCCAGGATC AACTGATTGC CGCGCTGCAG
ATCATCCAGC ACGGTGACAT CCAGCCTGAA GCCATGCGTG GCTCGTGGGC CGGCGCCATG
GGCCAGACCC AGTTCATCCC GACCACCTAC AACACCCATG CCGTGGACTT CGACGGCGAT
GGCCGCCGCG ACATCTGGAA CAGCACACCA GACGCCCTGG CCTCAACAGC GCACTACCTG
CAAAGTTCGG GCTGGAAACG CGGCCAACCG TGGGGCTTCG AGGTACAGGT GCCGGCCGGC
TTCGACTTCT GGCAGGCCGA TGGTGCACTG CGCAAACCGG TGAGTGAATG GCTGGCGATG
GGCGTGAAAC TGCCAGCGGG TACCCAGCTG CCGCCAGGTA GCAACCAGCT GTCTGCCGCC
CTGCTGCTGC CGGCCGGTGC ACGCGGCCCG GCGTTCCTGG TGCTGGACAA CTTCCGCGCC
ATCCTCAAGT ACAACAACTC GTCGTCCTAT GCCCTGGCGG TGAGCCTGCT CGGGGATCGC
TTCAGCGGCT GGGGCTTCAT TGCCGGCAGC TGGCCGAAAG AGGACCTGCC GCTCAGCCGC
AGCGAGCGCA TGGAGTTGCA GAACCTGTTG AACAGCCGCG GGCATGATGC GGGTAATGCC
GATGGCATTA TCGGGGCCAA TACCCGCAAG GCGATCCGCA ATGCCCAGCA AGGGCTGGGC
TGGCCGGCGG ATGGCTACCC GACCCATAAG CTGCTTGAGA GCCTGCGGCA GCAGTAA
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| Protein sequence | MLFRLIPRWE TRQLIAASSF ILLVACAEKP TAADALPLAP AQPNPVVTVP GATPDVSTDI
QPLQTFAQWQ AGFREQALQA GISPSTFDRA FLGVTPDLDV IKADRSQPEF TRPVWEYLEG
ALSPLRVRNG KKLLEQNAEL LTRLEQRYGV DRQVLVAVWG MESNFGQFQG SKSVIRSLAT
LAYEGRRPQF AQDQLIAALQ IIQHGDIQPE AMRGSWAGAM GQTQFIPTTY NTHAVDFDGD
GRRDIWNSTP DALASTAHYL QSSGWKRGQP WGFEVQVPAG FDFWQADGAL RKPVSEWLAM
GVKLPAGTQL PPGSNQLSAA LLLPAGARGP AFLVLDNFRA ILKYNNSSSY ALAVSLLGDR
FSGWGFIAGS WPKEDLPLSR SERMELQNLL NSRGHDAGNA DGIIGANTRK AIRNAQQGLG
WPADGYPTHK LLESLRQQ
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