Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4655 |
Symbol | |
ID | 5190851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5219616 |
End bp | 5221166 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589138 |
Product | AMP nucleosidase |
Protein accession | YP_001269959 |
Protein GI | 148549857 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01717] AMP nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.370825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.206703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAA CACCGATCAA TGGGGGTGTA TTTAACCAAG AAGGCAGGCA AGATGGATCA CATGCATGTC CAGACAGGAA GCACAGTGTG AGCCACGCTT TTGTAGTCGT TGATACCCCC GAACAGGCCG TCGACCGTCT GGCGGCCTTG CATGAACAGG CCACAGGTGC CCTGAGTCAG GCCCTGAAGC GTTACCTGAA GGACCGTACC GAGCCCGATA CCGATGAGCG CGACCTGTTC CGCTACCCGG CACTGCGCCT GACCTACTAC AGCCATGGCG AAGTCGCCGC CACCACCCGC GCTTATGCCA AGGTCCAGGT TGCCGGCACC TACAGCGTCA CCGTCACTCA GCCCGCTGCG TTCCGTGGCT ACCTGCTGGA GCAACTGCGC CCGCTGATGC ATGACTACAC CGTTACGGTA GAAGTCGGCG TCAGCGAGCA GAACATCCCT TACCCCTATG TGGTCGACCA GGGCGACGAA TTGGCTGGCA GCGGCATTAC TGCTGCGCAG TTGGCGCGGG TGTTCCCCAG CACCGACCTG TCGGCGGCCA CCGACAACAT CGCTGATGGC CTGTACGACT GGGACCATGC TGAAATCATG CCACTGGCAT TGTTCGATGC CGCGCGGGTC GACTTCTCGC TGCGCCGCCT GGTGCACTAC ACCGGCAGCG ACTGGCGCCA TGTACAGCCG TGGATCCTGC TGACCAACTA CCACCGCTAT GTCGACCAGT TCATCAGCCA TGGCCTGGAA CAGCTGCGTG ACGACTCGCG CTTCGTGCGT ATGGTGCTGC CGGGCAATGT CGTGATCGAA AAGGGCATGG ACCATGGCGA AACCCAGGCT CTGGTGGCCA GCGTGGTCTG GCACCGCTTC CAGATGCCGG CCTACCACCT GATCGCCGCC GACGGCAATG GCGTTACCTT GGTCAACATT GGTGTCGGCC CGTCCAACGC CAAGAACATC ACCGATCACC TGGCCGTGCT GCGCCCGCAT TGCTGGCTGA TGATCGGCCA CTGCGGCGGC CTGCGGCAGT CGCAAACCAT CGGCGACTAC GTGCTGGCAC ACGCCTATAT GCGCCGTGAC GGCATTCTCG ACCGGGTCGT GCCGCCGAAT ATCCCGATCC CGGCCCTGGC CGAAGTACAG ATGGCCTTGC AGGAGGCCGC CGCTCAGGTC ACTGGCGAGC GTGGCGAGCA GTTGAAAAAG CGCCTGCGCA CCGGCACGGT GCTGACCTAC GACGACCGCA ATTGGGAGCT GCGCTGGGCC CAGGAACGCC CGCTGATCAA CCTGTCGCGT GCCGTGGCGG TGGACATGGA AAGCGGCACC ATTGCTGCCC AGGGCTACCG TTTGCGCGTG CCTTACGGCA CCTTGCTGTG TGTGTCCGAC AAGCCGCTGC ACAGCGAGAT CAAACTGCCA GGTTCGGCCA ACGCCTTCTA CAACCGGGCG GTCAGCCAGC ACCTGAAGAT CGGCATTGCC GCCCTCGACC TGCTGCGCAC CGAGCTGAAC TCGCTGCACT CGCGTAAACT GCGCAGCTTC GATGAGCCGC CGTTCCGCTG A
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Protein sequence | MHPTPINGGV FNQEGRQDGS HACPDRKHSV SHAFVVVDTP EQAVDRLAAL HEQATGALSQ ALKRYLKDRT EPDTDERDLF RYPALRLTYY SHGEVAATTR AYAKVQVAGT YSVTVTQPAA FRGYLLEQLR PLMHDYTVTV EVGVSEQNIP YPYVVDQGDE LAGSGITAAQ LARVFPSTDL SAATDNIADG LYDWDHAEIM PLALFDAARV DFSLRRLVHY TGSDWRHVQP WILLTNYHRY VDQFISHGLE QLRDDSRFVR MVLPGNVVIE KGMDHGETQA LVASVVWHRF QMPAYHLIAA DGNGVTLVNI GVGPSNAKNI TDHLAVLRPH CWLMIGHCGG LRQSQTIGDY VLAHAYMRRD GILDRVVPPN IPIPALAEVQ MALQEAAAQV TGERGEQLKK RLRTGTVLTY DDRNWELRWA QERPLINLSR AVAVDMESGT IAAQGYRLRV PYGTLLCVSD KPLHSEIKLP GSANAFYNRA VSQHLKIGIA ALDLLRTELN SLHSRKLRSF DEPPFR
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