| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4639 |
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| Symbol | |
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| ID | 5194595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5204199 |
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| End bp | 5205152 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589122 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001269943 |
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| Protein GI | 148549841 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000315852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00689363 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAGAT CAGCACTGGC CCTGATTGCG ACCCCATCCA TGCCGTTGCC GTTGATCTAC
CACGAAGATT ACAGCCCGGA GTTCCCCGCT GAACACCGCT TCCCGATGGA CAAGTTCCGC
CTGCTGCACG ACCACCTGGT TGGCAGCGGG CTGACCACCG ACCAGGCCCT GCTGCGCCCG
GACATCTGCC CCAACGACAT CCTCGCCCTG GCCCACGACC GCAGCTACAT TGAGCGCTAC
ATGAACGGCG AGCTGTCGCG CGAGGACCAG CGCCGCCTCG GCCTGCCCTG GAGCGAGGCC
CTGGCCCGGC GTACCGTACG CGCCGTCGGC GGCTCACTGC TGACTGCCGA GATGGCGCTG
CAGCACGGCA TCGCCTGCCA CCTCGCCGGT GGCACCCACC ACGCCCATTA CGACCACCCC
GCCGGCTTCT GCATTTTCAA CGACCTGGCG GTCATCAGCC GCTACCTGCT GGAAGCAGGC
CGGGTACACC GGGTGCTGAT CTTCGACTGC GACGTGCACC AGGGTGACGG CACCGCGCGC
ATCCTGCACG ACACGCCCGA GGCCATCACC GTGTCGCTGC ACTGCGAGCA GAACTTCCCC
GCCCGCAAGG CACAAAGCGA CTGGGACATC CCCCTGCCCC GAGGCATGGG CGACACTGCC
TACCTGAGGG TGGTGGACGA CGCCCTCAAC TACCTGTTGC CGCTTTATCA ACCCGACCTG
GTGCTGTATG ACGCCGGTGT CGATGTGCAC AAGGACGACG CCCTGGGCTA CCTGCAGCTG
ACCGACGCAG GCGTTGCCGC CCGTGACGAA GCCGTGCTGC GCCACTGCCT GGGCCGCGAT
ATCCCGGTGA TGGGCGTGAT CGGCGGAGGC TACAGCAAGG ACCGCACAGC CTTGGCCAGA
CGCCACGGCA TCCTTCACCA CAGCGCGGCA CGTGTCATAG GTTGTTCACA ATGA
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| Protein sequence | MARSALALIA TPSMPLPLIY HEDYSPEFPA EHRFPMDKFR LLHDHLVGSG LTTDQALLRP
DICPNDILAL AHDRSYIERY MNGELSREDQ RRLGLPWSEA LARRTVRAVG GSLLTAEMAL
QHGIACHLAG GTHHAHYDHP AGFCIFNDLA VISRYLLEAG RVHRVLIFDC DVHQGDGTAR
ILHDTPEAIT VSLHCEQNFP ARKAQSDWDI PLPRGMGDTA YLRVVDDALN YLLPLYQPDL
VLYDAGVDVH KDDALGYLQL TDAGVAARDE AVLRHCLGRD IPVMGVIGGG YSKDRTALAR
RHGILHHSAA RVIGCSQ
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