Gene Pput_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4576 
SymbolrbfA 
ID5190351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5119681 
End bp5120079 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content61% 
IMG OID640589056 
Productribosome-binding factor A 
Protein accessionYP_001269880 
Protein GI148549778 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.63413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG AATATAGCCG TACCCAACGT ATTGGCGATC AGATGCAGCG CGAGCTGGCC 
GAGCTGATCC GTCGCGAAGT CAAGGACCCG CGTGTCGGTC TGGTGACTAT CACCGCCGTG
GACGTGAGCC GTGACCTGGG CCATGCCAAG GTGTTCATCA CCGTCATGGG CGAGGAAACC
CCGGATGCCG TGCAGCAATC GCTCAAGGCA TTGAATAGCG CCGCCAGCTT CCTGCGTCTG
CACCTGGGGC GTTCGATGCA ACTGCGCAGC GTGCCGCAGC TGCACTTCCA TTTCGATGAA
AGTGTCAGCC GTGGTGTGCA CCTGTCGGCG CTGATCGAGC GTGCAGTGGC CGAAGACCGC
CTGCACAAGG ATGCCGACGA GTCGGACACC AAGGAGTAA
 
Protein sequence
MAKEYSRTQR IGDQMQRELA ELIRREVKDP RVGLVTITAV DVSRDLGHAK VFITVMGEET 
PDAVQQSLKA LNSAASFLRL HLGRSMQLRS VPQLHFHFDE SVSRGVHLSA LIERAVAEDR
LHKDADESDT KE