Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4543 |
Symbol | ilvH |
ID | 5194719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5080915 |
End bp | 5081406 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640589023 |
Product | acetolactate synthase 3 regulatory subunit |
Protein accession | YP_001269847 |
Protein GI | 148549745 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0246688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000231458 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGCACA TCATTTCCCT GCTGCTGGAA AACGAACCAG GTGCGTTGTC CCGCGTGGTC GGCCTGTTCT CCCAGCGCAA CTACAACATT GAAAGCCTGA CTGTAGCGCC AACCGAAGAC CCGACCCTGT CGCGTCTGAC GCTGACCACC GTTGGCCATG ACGAAGTGAT CGAACAGATC ACCAAGAACC TGAACAAGCT GGTCGAAGTG GTCAAGCTTG TCGACCTGTC GGAAAGCGCT CACATCGAGC GTGAACTGAT GCTGGTCAAG GTCAAGGCCA CCGGTGCCCA GCGTGCCGAG ATCAAGCGCA CCACGGATAT CTTCCGTGGC CAGATCGTCG ACGTGACCGC CAGCGTGTAC ACCGTGCAGC TGAGCGGTAC CAGCGACAAA CTGGACAGCT TCATCCAGGC GATCGGCACT GCATCGATTC TGGAAACCGT GCGCAGCGGC GTTACCGGCA TTGCCCGTGG CGACAAAGTG CTCAGCATCT AA
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Protein sequence | MRHIISLLLE NEPGALSRVV GLFSQRNYNI ESLTVAPTED PTLSRLTLTT VGHDEVIEQI TKNLNKLVEV VKLVDLSESA HIERELMLVK VKATGAQRAE IKRTTDIFRG QIVDVTASVY TVQLSGTSDK LDSFIQAIGT ASILETVRSG VTGIARGDKV LSI
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