| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4539 |
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| Symbol | |
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| ID | 5191370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5077136 |
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| End bp | 5077747 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640589019 |
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| Product | putative sulfite oxidase subunit YedZ |
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| Protein accession | YP_001269843 |
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| Protein GI | 148549741 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2717] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000898967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00229075 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTACC CCTGGTTTCG CTTGGCCATC TTTGTCGTAG GCTGCCTGTT CCCGGTGTGG
TGGCTATATG AAGCGGCGAT GAACCTGCTG GGGCCTGATC CCGGGAAGAT CATGATGGAT
CGTCTTGGGC TTGGGGCGCT TACCTTCCTG TTGGTGACCT TGAGCATGAC GCCACTGCAG
AAGCTGACGG GCTGGTCTGG CTGGATCGTG GTTCGCCGGC AGCTGGGGTT ATGGGTGTTC
GCCTATATAG TGCTGCATAT TCTGGCCTAC CTGTTTTTTA TTCTAGGGCT GGATTGGGGG
CAGTTGGCGG TGGAGTTGCG CAAGCGCCCC TACATTATTG TGGGGGCGCT GGGGTTCCTG
GGGTTGCTGG CGCTGGCGGT CACCTCGAAC CGGTACAGCC AACGGCGGCT GGGCGCGCGG
TGGAGGAAGC TGCACAGGTT GGTGTACGCG GTGCTTGGGT TGGGCTTGCT GCATTTCCTG
TGGATCGTGC GTTCCGACCT TCGGGAATGG GCGATCTATG CGTTTATTGG GGCTGTGTTG
ATGGTATTGC GGATACCTGC TGTTGCGCGG GCTCTTCCCA GGGTTGCCAG GAAGCAGGGT
AGGGCGGTTT GA
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| Protein sequence | MRYPWFRLAI FVVGCLFPVW WLYEAAMNLL GPDPGKIMMD RLGLGALTFL LVTLSMTPLQ
KLTGWSGWIV VRRQLGLWVF AYIVLHILAY LFFILGLDWG QLAVELRKRP YIIVGALGFL
GLLALAVTSN RYSQRRLGAR WRKLHRLVYA VLGLGLLHFL WIVRSDLREW AIYAFIGAVL
MVLRIPAVAR ALPRVARKQG RAV
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