| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4517 |
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| Symbol | |
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| ID | 5190686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5043283 |
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| End bp | 5043888 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588992 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001269821 |
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| Protein GI | 148549719 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCG AACTGCTGCC GGAAACCCCT TCGCAGACTG CCGGCCCCTA TGTGCACATC
GGCCTGGCCC TGGAAGCGGC CGGCAACCCG ACCCGCGATC AGGAAATCTG GAACCGCCTG
GCCAAGCCAG ACGCACCAGG CGAGCACATT CTGCTGCTCG GCCAGGTGTA TGACGGTAAC
GGCCACCTGG TGCGCGACTC GTTCCTGGAA GTGTGGCAGG CCGACGCTAA CGGCGAGTAC
CAGGATGCCT ACAACCTGGA AAACGCCTTC AACAGCTTCG GCCGCACCGC CACGACCTTC
GATGCCGGTG AGTGGACGCT GCACACGGTC AAGCCGGGTG TGGTGAACAA CGCTGCGGGC
GTGCCGATGG CGCCGCACAT CAACATCAGC CTGTTTGCCC GTGGCATCAA CATCCACCTG
CACACGCGCC TGTATTTCGA TGATGAGGCC CAGGCCAATG CCAAGTGCCC GGTGCTCAAC
CTGATCGAGC AGCCGCAGCG GCGTGAAACC TTGATTGCCA AGCGTTGCGA AGTGGATGGG
AAGACGGCGT ACCGCTTTGA TATCCGTATT CAGGGGGAAG GGGAGACCGT CTTCTTCGAC
TTCTGA
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| Protein sequence | MPIELLPETP SQTAGPYVHI GLALEAAGNP TRDQEIWNRL AKPDAPGEHI LLLGQVYDGN
GHLVRDSFLE VWQADANGEY QDAYNLENAF NSFGRTATTF DAGEWTLHTV KPGVVNNAAG
VPMAPHINIS LFARGINIHL HTRLYFDDEA QANAKCPVLN LIEQPQRRET LIAKRCEVDG
KTAYRFDIRI QGEGETVFFD F
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