Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4510 |
Symbol | |
ID | 5193004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5035081 |
End bp | 5036205 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588985 |
Product | rRNA (guanine-N(2)-)-methyltransferase |
Protein accession | YP_001269814 |
Protein GI | 148549712 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGT TGACCACCCC CTATGCCGAA CTCGACCTGA TCCGCCAGCC GGAGCAGGCC AACGACCCGT TGCAGGCCTT CGATGCCGCC GACGAGTACC TGCTTGCGCA GCTACACGAT CAGGCACCCG ACGCCAATTG CCGGGTACTG GTGCTCAATG ACAGCTTCGG TGCCCTGGCC GCCAGCCTGG CGGGCCAGTT GCAGGTGGTC AGCAGCGGTG ACTCGCACCT GGGGCACCTG GCCCTGGAAA AGAACCTGGC GCGCAATGGC CTGCCGTTCG ACAGTGTGCC GTTCGTACCG GCCAGCGAAC ACTGGCAAGG CCCGTTCGAC CGGGTGCTGG TGCGTGTACC CAAGACCCTG GCCCTGCTGG AAGAACAACT GATCCGCCTG CAAGGCCAGT TGGCACCCGG TGCGCAGGTG ATTGCCGGTG CGATGATCAA GCACCTGCCG CGGGCGGCCG GCGACCTGAT GGAAAAGTAC ATCGGCCCCG TACAGGCTTC GCTGGCCCTG AAAAAGGCCC GTTTGCTGAC AGCAACGGTT GCCGAGCGGC CGCTCGCCAA GTCCCCCTAC CCCAGCTGCT ACCGCCTCGA CGTGCCGGCA CTTGACTTGA TCAACCACGC CAACGTGTTC TGCCGTGAAG GCCTGGATAT CGGGACGCGG GCGTTCCTCC CGCATCTACC ACGCGACCTC GGCCGTGCGC GGGTGGCAGA CCTGGGCTGC GGCAACGGCG TGCTCGCAAT CGCCAGCGCC CTGGCCAATC CGGAGGCCGA GTACACCCTG GTCGACGAGT CGTACATGGC AGTGCAATCG GCGCAGGAGA ACTGGCTGGC AGCGTTGGGC GAGCGCCCGG CGACCTTCTT CGCGGCCGAT GGCCTGGCCG GGCTGGAGAA GCAGTCGCTG GATGTGGTGC TGTGCAACCC GCCGTTCCAT CAACAGCAGG TAGTGGGCGA TTTCCTCGCC TGGCGCATGT TCCAGCAGGC GCGTGAAGCG CTGGTGGTAG GTGGGGCGCT GTACATCGTG GGTAACCGGC ACCTGGGCTA TCACAGCAAG CTGGCGCGGT TGTTCCGGGG AGTGGAGCAG GTGGCGGCAA CGCCCAAGTT CGTCATTCTG AAAGCCCGCA AGTAA
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Protein sequence | MPLLTTPYAE LDLIRQPEQA NDPLQAFDAA DEYLLAQLHD QAPDANCRVL VLNDSFGALA ASLAGQLQVV SSGDSHLGHL ALEKNLARNG LPFDSVPFVP ASEHWQGPFD RVLVRVPKTL ALLEEQLIRL QGQLAPGAQV IAGAMIKHLP RAAGDLMEKY IGPVQASLAL KKARLLTATV AERPLAKSPY PSCYRLDVPA LDLINHANVF CREGLDIGTR AFLPHLPRDL GRARVADLGC GNGVLAIASA LANPEAEYTL VDESYMAVQS AQENWLAALG ERPATFFAAD GLAGLEKQSL DVVLCNPPFH QQQVVGDFLA WRMFQQAREA LVVGGALYIV GNRHLGYHSK LARLFRGVEQ VAATPKFVIL KARK
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