| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4509 |
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| Symbol | |
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| ID | 5195308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5034277 |
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| End bp | 5034984 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640588984 |
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| Product | autoinducer-binding domain-containing protein |
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| Protein accession | YP_001269813 |
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| Protein GI | 148549711 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCACT GGAAACCCGA GTATCTTCAT GCGTTCGTCA GCGAACGCAG CCCGCAGAAG
CTATTCGACA TTGCAGTCCA TCTGGCTCAG GACCTGGACA TGGATTACCT TGGGCTGAAC
ATCCGCATTC AGATCGCTAC GCAAACGCCA AGGCTGTACC TCTACAGCAA CTACCCAAGT
GAGTGGATCG AACGCTACCA GCGCGACGAC TTCTACAAGC AGGACCCGGC AGCGAACCTG
AGTCACAGCT CGACGATGCC GGTGCTGTGG ACCGATGACC TGTACAAGGA AGCTCCGCAA
TTTCGCGAAA CGGCCTGCCA GCATGGCTTG CGCCACGGCT GGACACAGTC GCTTCACGAT
CAGCAGCACA ACGAGAGCCA GATCAGTGTC GCTCGGCCAA ACGGCCACAT CGATATGCTC
GAGCTGTACG ACAAAGCCGG CAGTGTGCAG TGGCTGTGCC ACACCCTTCA CGCTGTACTG
GGCGAGCACC ACCTGAACGC CCTATGCCCA CCCCAGCCGA AAATGAGCGA GCGTGAACTG
GAAGTGCTGA AATGGTCTGC CGCCGGCAAG ACCGCTGCCG ATGTTGCCTC CATCCTCTCG
CTGTCGCAAA GCACGGTCAA TTTCCATATC CGCAGCGTGA TCACCAAGAC CAACGCAGCC
AACAAGGCCG GAGCCATTGC CATTGCCGCC TTGCGTGGCT GGATCTGA
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| Protein sequence | MLHWKPEYLH AFVSERSPQK LFDIAVHLAQ DLDMDYLGLN IRIQIATQTP RLYLYSNYPS
EWIERYQRDD FYKQDPAANL SHSSTMPVLW TDDLYKEAPQ FRETACQHGL RHGWTQSLHD
QQHNESQISV ARPNGHIDML ELYDKAGSVQ WLCHTLHAVL GEHHLNALCP PQPKMSEREL
EVLKWSAAGK TAADVASILS LSQSTVNFHI RSVITKTNAA NKAGAIAIAA LRGWI
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