Gene Pput_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4484 
Symbol 
ID5191332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5010988 
End bp5011893 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID640588959 
Productalpha/beta hydrolase fold 
Protein accessionYP_001269788 
Protein GI148549686 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATGG CCGAGATTCC ATTGTGCGTC TGGCGTACCC GGGCACAGAG TTTCATGTTC 
CGGGGCCAGA GCATCCGCTA CTGGACCGCA GGGCAAGGAG AGCCTCTGCT TCTGTTACAC
GGTTTCCCCA CCGCCAGTTG GGACTGGCAC TACCTGTGGG GCCCTCTGAG CCAACGTTTC
CGGGTGATCG CTTGCGACAT GCTTGGCTTT GGTGATTCGG ACAAGCCCGT CGATCACACT
TACAGCCTGA TGGAGCAGGC AGACCTGCAG CAGGCATTGC TTGCCCATCT GCAGGTCGCG
CAGCCCGTGC ACCTGTTGGC CCACGACTAC GGCGGCAGCG TGGCTCAGGA ACTGCTGGCG
CGACACCATG AGCAGCGTGC CGACATTGCC AGTTGCGTGT TCCTCAACAG CGGGCTGTTC
CCCGAAAGCT GCCGCATGCT ACTGATCCAG AAGCTGCTGC TCAGCCGGTT TGGCTGGCTG
GTCGGGCGCT CGTTCGGGCG TGACGACCTG GTGCGTAACG TGATTCAGGT CTACGGCCCC
TGCACGCATC CCAGTGAAAG CGCGCTGGAT GATCTCTGGA GCCTGATCGC TGCCAACCGG
GGCACGCGCA TCCTGCACAA GCTGGTGGGC TACATGCCGG AGCGCAGGTT GCACCGCGAA
CGCTGGGTCG GGGCGATGCA ACGTAAAGGC GTGCCGCTGC GCTTGATCAA TGGCGTGGTC
GACCCGCTTT CCGGCGCGCA CATGCTTGAG CGCTACCGGC AACTGATACC GGAGCCGGAC
ACCGTGCAGT TACTGGGCAT TGGCCATTAC CCGCATACCG AAGCGCCCGT GCAGGTGCTG
CGCCACTACC TGGCCTTTCG TGAGCAGCCG CTGAGCTTCT ACCCGCTGAA AGTGGCGTGG
TCATGA
 
Protein sequence
MPMAEIPLCV WRTRAQSFMF RGQSIRYWTA GQGEPLLLLH GFPTASWDWH YLWGPLSQRF 
RVIACDMLGF GDSDKPVDHT YSLMEQADLQ QALLAHLQVA QPVHLLAHDY GGSVAQELLA
RHHEQRADIA SCVFLNSGLF PESCRMLLIQ KLLLSRFGWL VGRSFGRDDL VRNVIQVYGP
CTHPSESALD DLWSLIAANR GTRILHKLVG YMPERRLHRE RWVGAMQRKG VPLRLINGVV
DPLSGAHMLE RYRQLIPEPD TVQLLGIGHY PHTEAPVQVL RHYLAFREQP LSFYPLKVAW
S