| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4442 |
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| Symbol | |
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| ID | 5192611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4965321 |
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| End bp | 4966880 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588917 |
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| Product | carbohydrate-binding and sugar hydrolysis |
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| Protein accession | YP_001269746 |
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| Protein GI | 148549644 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.094084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.778652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC ACCCGCACTT ACGTCACAGC CTGTTGGCCA GTGCCTTGCT GCTGGCAAGC
GGCCTGGCCA CTGCCGCAGA ACCCCAGGTG ATCGCCAAGG AGCTGCAGCA GGCCAAGACC
TATACGGTGG CCAGCGCACC GATCGAGCCG CTGCAGATGG ACCCGCCAAA GCTGCCCGAC
CTCACCGGTT TCACGGCCGA GGCGGTGCAG AAGAAAATCG ACCGCCGCCA CAAGGGCAAG
GTCAGCCTGC GCCGTATGTT CCAGGAGGAC ACCCTCAAGG AGTTCGTCGG CGGCGACAAC
AAGGCCGCCG AGTGGGTGCA GCGCCAGCAC GGCATCCCGC AGGCGATCTT CGTCGATGAC
GGCCATGTCG ACCTGACCGA GCTGAGCAAG AAGGTGCCCA AACAGTACTT CAGCGAAGTC
GAGCCTGGGG TTTACCTGGC ACGCCTGCCG ATCGTGGTCG GGCAAAAGGG CATCCTCGAG
ATCGACGGCA GGGTCAAACA GCTGCGCCTG TCCCAGGAGG GCGGCGCTTT TCTGGTCAAT
GACGGCAAGC TGTTCGTAAC CGACACCCAG GTGACCGGCT GGCGGGAAAA GGACAACGGC
CCGTCGACCT TCCGCTCGCC CAAGGAATTC CGCCCGTTTC TGCTGTCTTG GGGCGGTACC
GAGACCTATA TCGTCAATAC GAAGATGGCC AGCTTCGGCT ACGCCAAGTC CAAGTCGTAT
GGCGTGAGCA TCTCGCAGTA CACGCCGAAC ATGGCCAAGC GCATGGGCCG CCCGGAGCCC
ACCGGCTGGA TCATCGGTTC GGAGTTCAGC GACATGTGGT ACGGCTTCTA CTGCTACGAA
ACCCAGGACT TCGTGATCAA GGACAGCACC TACCGCGACA ACATCGTCTA CGGCATCGAC
CCGCACGACC GTTCGCATCG CCTGATCATC GCCGGCAACA CGGTGTACGG CACCAAGAAG
AAGCACGGCA TCATCGTTTC GCGTGAGGTC AACGACAGCT GGATCATCAA CAACAAGAGC
TACGACAACA AGCTCTCGGG CGTGGTGATC GACCGTAACA GCGTCAACAA CCTGGTGGCC
TACAACGAGA TCTACCGCAA CCACACCGAC GGCATCACCC TGTACGAAAG CGGCGACAAC
CTGATCTGGG GCAACAAGCT GGTCAACAAC CGCCGCCACG GCATCCGCGT GCGTAACAGC
GTAAACATCC GCCTGTACGA AAACGTCGCC ATGGCCAACG GCCTGGTCGG CGTATACGGC
CACATCAAGG ACCTGTCCGA CACCGACCGC GACATCGCCC TCGACCCGTT CGACACCAAG
GTGTCGCTGA TCGTGGTGGG TGGCGAGCTG TCGGCCAACG GCTCCGGCCC GCTGTCGATC
GACTCGCCGC TGTCGGTCGA GCTGTACAAG GTGTCCATGC TCGCCCCACG CAAGGCCAGC
GGCATCAGCC TCAATGGTGT GCTGGGTGAG CGCCAGGACG AAATCCTCGA CCTGCTGGTA
CGCCAGCAGA AGGCTGTGCT GATCGACCCG GTCGAACGCC AGACCGAAAT GATCGATTAA
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| Protein sequence | MNLHPHLRHS LLASALLLAS GLATAAEPQV IAKELQQAKT YTVASAPIEP LQMDPPKLPD
LTGFTAEAVQ KKIDRRHKGK VSLRRMFQED TLKEFVGGDN KAAEWVQRQH GIPQAIFVDD
GHVDLTELSK KVPKQYFSEV EPGVYLARLP IVVGQKGILE IDGRVKQLRL SQEGGAFLVN
DGKLFVTDTQ VTGWREKDNG PSTFRSPKEF RPFLLSWGGT ETYIVNTKMA SFGYAKSKSY
GVSISQYTPN MAKRMGRPEP TGWIIGSEFS DMWYGFYCYE TQDFVIKDST YRDNIVYGID
PHDRSHRLII AGNTVYGTKK KHGIIVSREV NDSWIINNKS YDNKLSGVVI DRNSVNNLVA
YNEIYRNHTD GITLYESGDN LIWGNKLVNN RRHGIRVRNS VNIRLYENVA MANGLVGVYG
HIKDLSDTDR DIALDPFDTK VSLIVVGGEL SANGSGPLSI DSPLSVELYK VSMLAPRKAS
GISLNGVLGE RQDEILDLLV RQQKAVLIDP VERQTEMID
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