| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4424 |
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| Symbol | |
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| ID | 5190273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4943779 |
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| End bp | 4944939 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588899 |
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| Product | 2-alkenal reductase |
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| Protein accession | YP_001269728 |
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| Protein GI | 148549626 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.377382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGG CTTTGCGTTA CTTCGGCTGG CCCCTGCTTA CCGGCATACT GATCGCCATG
CTGATCATCC AGCGTTTTCC GCAATGGGTC GGGCTGCCCA GCCAGGACGT CAACCTGCAG
CAAGCGCCAC AGACCACGCG GATCATGCAA GGCCCGGTGT CGTACGCCGA CGCCGTGACC
CTGGCCGCCC CGGCGGTGGC CAACCTGTAC ACCACCAAGG TGGTGAACAA AAGCGCCCAC
CCGCTGTTCG AAGACCCGCA GTTCCGCCGC TTCTTCGGCG ATAACCTGCC CAAACAGCGC
CGCTGGGAAT CAAGCCTGGG TTCGGCGGTA ATCATGAGCC CAGAGGGCTA CCTGCTGACC
AACAACCATG TCACCAGCGG CGCCGACCAG ATCGTCGTAG CGCTGAAGGA TGGCCGCGAA
ACCCTGGCCC GCGTGATCGG CAGCGATCCG GAAACCGACC TGGCGGTGCT GAAGATCGAC
TTGAAGAACC TGCCGGCGAT CACCATCGGC CGTTCCGACA CCATTCACAT CGGCGACGTG
TCGCTGGCCA TCGGCAACCC GTTCGGCGTC GGCCAGACGG TGACCATGGG CATCATCAGC
GCCACTGGCC GCAACCAGCT GGGGCTGAAC AACTACGAAG ACTTCATCCA GACCGACGCG
GCGATCAACC CGGGCAACTC CGGTGGCGCG CTGGTGGATG CCAATGGCAA CCTGATCGGC
ATCAATACCG CGATCTTTTC CAAGTCCGGT GGCTCGCAGG GCATCGGCTT CGCCATCCCG
GTAAAACTGG CACTGGAGGT GATGAAGTCG ATCGTCGAAC ACGGCCAGGT GATCCGTGGC
TGGCTGGGTA TCGAAGTACA GCCGCTGAGC CAGGAGCTGG CAGAGTCGTT CGGCATGAAG
GACCGCCCAG GCATCGTGGT GGCGGGTATC TTCCGCGAGG GGCCAGCGGC CAAGGCCGGG
CTGCAACTGG GTGACGTGAT CCTGAGCATC AATGGCGAGC CGGCCGGCGA CGGGCGCAAG
TCGATGAACC AGGTTGCGCG GATCAAACCC AACGAGAAGA TCACCATCGA GGTGATGCGC
AACGGTCAGC AATTGAAGCT GATCGCCGAG GTGGGGCTGC GGCCGCCGCC GGCGCCGGCT
GTAACGCAAG AAGAAAAGTA A
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| Protein sequence | MFKALRYFGW PLLTGILIAM LIIQRFPQWV GLPSQDVNLQ QAPQTTRIMQ GPVSYADAVT
LAAPAVANLY TTKVVNKSAH PLFEDPQFRR FFGDNLPKQR RWESSLGSAV IMSPEGYLLT
NNHVTSGADQ IVVALKDGRE TLARVIGSDP ETDLAVLKID LKNLPAITIG RSDTIHIGDV
SLAIGNPFGV GQTVTMGIIS ATGRNQLGLN NYEDFIQTDA AINPGNSGGA LVDANGNLIG
INTAIFSKSG GSQGIGFAIP VKLALEVMKS IVEHGQVIRG WLGIEVQPLS QELAESFGMK
DRPGIVVAGI FREGPAAKAG LQLGDVILSI NGEPAGDGRK SMNQVARIKP NEKITIEVMR
NGQQLKLIAE VGLRPPPAPA VTQEEK
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