Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4398 |
Symbol | |
ID | 5195002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4919309 |
End bp | 4920184 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588875 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001269704 |
Protein GI | 148549602 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.258286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGATG TGGCAGGGGC TTCGAAATCC GCGGTGGGGA CGCTGTATGT GGTGGCAACC CCCATCGGCA ACCTCGACGA CATGAGCGCC CGGGCGCTGA AGGTGCTGGC GGACGTGGCG CTGATCGCCG CCGAAGACAC CCGTCATTCG ATCCGTCTGC TGCAACACTT TGGCATTGAT ACGCCGTTGG CCGCTTGTCA TGAGCACAAC GAGCGTGACG AGGGCGGGCG TTTTCTCTCC AAGCTGCTGG CGGGTGAAAA TGTGGCGCTC GTCTCTGATG CCGGCACGCC TCTGATTTCC GACCCGGGCT ACCACTTGGT GCGTCAGGCG CGGGCCGCAG GGGTGAGCGT GGTGCCGGTG CCGGGCGCCT GTGCCTTGAT CGCCGCGCTA TCGGCGGCAG GCCTGCCATC GGACCGCTTC ATCTTCGAAG GCTTCCTGCC GGCCAAGCAG GCAGGGCGCC GGGCGCGCCT GGAGCAGGTG AGGGAAGAAC CGCGCACGTT GATCTTCTAT GAAGCCCCGC ATCGCATCCT GGAGTGTCTT GAAGACATGG AGGCGGTATT TGGTGGCGAT CGTCCTGCGT TGCTGGCGCG CGAACTGACC AAGACCTTCG AGACCCTCAA GGGTTTGCCG CTGGCTGAGT TGCGTGCGTT CGTAGCCGGC GACAGCAATC AGCAGCGCGG TGAGTGCGTG GTGCTGGTCG GCGGTTGGAG TGCGCCGGAG GGCGAGCAGG CCATCAGTGC CGAAGCACAG CGCGTGCTCG ACCTGCTGTT GGCTGAGTTG CCACTGAAGC GGGCGGCGGC GCTTGCAGCG GAAATTACCG GGGTGCGCAA GAACCTCTTG TATCAACTTG CCCTGGAAAA GCAGAAAGCC GAGTAG
|
Protein sequence | MTDVAGASKS AVGTLYVVAT PIGNLDDMSA RALKVLADVA LIAAEDTRHS IRLLQHFGID TPLAACHEHN ERDEGGRFLS KLLAGENVAL VSDAGTPLIS DPGYHLVRQA RAAGVSVVPV PGACALIAAL SAAGLPSDRF IFEGFLPAKQ AGRRARLEQV REEPRTLIFY EAPHRILECL EDMEAVFGGD RPALLARELT KTFETLKGLP LAELRAFVAG DSNQQRGECV VLVGGWSAPE GEQAISAEAQ RVLDLLLAEL PLKRAAALAA EITGVRKNLL YQLALEKQKA E
|
| |