| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4392 |
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| Symbol | murE |
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| ID | 5191739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4913636 |
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| End bp | 4915126 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588869 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001269699 |
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| Protein GI | 148549597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.133373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0460265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAA TGCCACTAAG CAAACTTTTC GCCCACGCCA GCCGTGATCC ATTGATTCGT
GAGCTGACCC TGGACAGCCG TAATGTGCGC CCGGGTGACT TGTTCCTGGC GGTGCCGGGT
GCCAAGGTCG ATGGCCGCGA GCATATCGCC GATGCCCTGG CCCGTGGCGC TGCCGCCGTG
GCCTACGAAG AGCAGGGTGC CAGCGTGCTG CCGCTGACCG ATGCGCCGCT GATTCCGGTC
AAAGGCCTGA TCGCTCAGCT GTCAGACATC GCCGGGCGCT TCTACGGTGA ACCGAGCCGC
CAGTTGAATC TGGTCGGCGT GACCGGCACC AACGGCAAGA CAAGCGTGAC CCAACTGGTA
GCCCAGGCAC TCGACCTGCT TGGCCAGCGC TGCGGCCTGA TTGGCACCCT GGGGACCGGT
TTCTACGGCG AGTTGCAGAG CGGCCGTCTG ACCACGCCCG ACCCGATTGC CGTGCAATCG
ACCCTCAACG ACCTCAAGAA AGGCGGCGCC AAGGCCGTGG CCATGGAAGT GTCTTCCCAT
GCCCTGGAGC AAGGCCGGGT TGCCGCACTG GAATTCGACA TCGCGGTGAT GACCAACCTG
TCCCGCGACC ACCTCGACTA TCACGGCAGC ATGGAAGCCT ATGAGGCCGC CAAGGCCAAG
CTGTTCGCCT GGCCGAGCCT GCGTTGCCAG GTGGTCAACC TGGATGACGA CTTTGGTCGT
CGTCTGGCGG CCGACTTTGC GCGTCGCCCG AGTGTCGACC ATATCGAAAC CCGGCTGCTG
AGCTACAGCC TGGAAAACCC TGAAGCCTCG CTGTTCTGCC GCGAAGCCGT ATTCAGTGAC
GATGGCGTGC GCGCCACCCT CGTCACCGCC CAAGGTGAGC GTATCTTGCG CAGCCAACTG
CTGGGTCGCT TCAACCTGAG CAACATGCTG GCCGCTGTGG CGACCCTGCT GGCGCTGGAC
TATGCGCTGG ACGAGATCCT CAAGGTCACG CCGCAACTGC AGGGGCCGGT AGGCCGCATG
CAGCGCCTGG GTGGCGGCGA CAAGCCGCTG GTGGTGGTCG ACTATGCGCA CACGCCGGAT
GCACTTGAAA AAGTACTCGA GGCCCTGCGC CCGCACGCTC ATGGCAAACT GTTGTGCCTG
TTCGGCTGCG GCGGTGACCG TGATCGCGGC AAGCGCCCGC TGATGGCCGA AGTGGCCGAG
CGCCTGGCCG ACCGCGTACT GGTCACCGAC GACAACCCGC GCACTGAAGA TCCGTCGCGC
ATCTTCGATG ACATTCGCCC CGGTTTCACC AGGCCTGACG ACGTCGAGTT CGTCGCCGGG
CGTGGCGAAG CCATTGCGCA CCTGATTGCC ACCGCCGCTG CCAACGATGT GATCGTGCTG
GCCGGCAAGG GGCACGAGGA TTACCAGGAG ATCAATGGCG AGCGCCATGA TTTCTCCGAT
TTGACCGAAG CCGAAAAGGC ACTTGCAGCC TGGGAGGCTC CACATGCTTA A
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| Protein sequence | MMTMPLSKLF AHASRDPLIR ELTLDSRNVR PGDLFLAVPG AKVDGREHIA DALARGAAAV
AYEEQGASVL PLTDAPLIPV KGLIAQLSDI AGRFYGEPSR QLNLVGVTGT NGKTSVTQLV
AQALDLLGQR CGLIGTLGTG FYGELQSGRL TTPDPIAVQS TLNDLKKGGA KAVAMEVSSH
ALEQGRVAAL EFDIAVMTNL SRDHLDYHGS MEAYEAAKAK LFAWPSLRCQ VVNLDDDFGR
RLAADFARRP SVDHIETRLL SYSLENPEAS LFCREAVFSD DGVRATLVTA QGERILRSQL
LGRFNLSNML AAVATLLALD YALDEILKVT PQLQGPVGRM QRLGGGDKPL VVVDYAHTPD
ALEKVLEALR PHAHGKLLCL FGCGGDRDRG KRPLMAEVAE RLADRVLVTD DNPRTEDPSR
IFDDIRPGFT RPDDVEFVAG RGEAIAHLIA TAAANDVIVL AGKGHEDYQE INGERHDFSD
LTEAEKALAA WEAPHA
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