| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4379 |
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| Symbol | secA |
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| ID | 5190565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4897128 |
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| End bp | 4899947 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588856 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001269686 |
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| Protein GI | 148549584 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.143191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0196444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTTC GCATGCGGCC TATGGGCTGC ACGGGCGACT CATGGGGCCG CCCTCCATCC
CTACGTGTGG AAGATCCTGC CGATATGTTT GCGCCTTTGT TAAAAAAACT TTTTGGAAGC
AAGAACGAGC GTGAAGTCAA ACGCATGCTC AAGACGGTGA GTATCGTCAA TGCCTTCGAA
GAGAAGATGG TGGCCCTCTC CGACGAGCAA CTGCGGGGCA AGACTGCAGA GTTCAAGGAA
CGCCTGGCCA AAGGCGAGAC ACTGGACCAA TTGCTGCCCG AAGCCTTCGC CGTGGCCCGC
GAGGCCGGCA AGCGTGTAAT GGGCATGCGC CATTTCGATG TGCAGTTGAT CGGCGGCATG
ACCCTGCACG AGGGTATGAT CGCAGAAATG CGCACCGGTG AAGGCAAGAC CTTGGTCGGT
ACCCTGGCCG TCTACCTCAA CGCATTGTCC GGCAAGGGCG TGCATGTGGT CACCGTCAAC
GACTACCTGG CGCGCCGTGA CGCCAACTGG ATGCGCCCGC TGTACGAGTT CCTCGGGCTG
TCGGTCGGTA TCGTCTCGGC CTTCCAGCCG CCGGAAGAAA AGCGCGCCGC CTATGCAGCC
GACATCACCT ACGGCACCAA CAACGAATTC GGGTTCGACT ACCTGCGCGA CAACATGGCG
TTCAGCCAGG ACGAGAAGTT CCAGCGTGAA CTGAACTTCG CCGTGATCGA CGAAGTCGAC
TCCATCCTCA TCGACGAAGC GCGTACCCCG CTGATCATTT CCGGTCAGGC CGAGGACAGC
TCCAAGCTGT ATATCGAGAT CAACCGCCTG ATCCCGCGCC TCACCCAGCA CATCGAAGAG
GTCGAAGGCC AGGTCACCCA GGAAGGCCAC TTCACCATCG ACGAGAAGAG TCGCCAGGTG
GAGCTGAACG AAGCCGGTCA CCAGTTCATC GAAGAGATGC TGGCCCAGGC GGGCCTGCTG
GCTGAGGGCG AGAGCCTGTA CTCCGCGCAC AACCTGGGCT TGCTGACACA CGTCTACGCC
GGTCTTCGTG CACACAAGCT GTTCCACCGC AACGTCGAGT ACATCGTCCA GGACGGCCAG
GTTCTGCTGA TCGACGAACA CACCGGCCGT ACCATGCCGG GCCGTCGCCT GTCCGAGGGC
CTGCACCAGG CCATCGAGGC CAAAGAGAAC CTGAACATCC AGGCCGAGAG CCAGACCCTG
GCTTCGACCA CCTTCCAGAA CTACTTCCGC CTGTACACCA AGCTGTCCGG CATGACCGGT
ACCGCCGACA CCGAAGCATT CGAGTTCCAG TCGATCTACG GCCTGAACGT GATGGTCATT
CCGCCGAACA AGCCACTGGC GCGTAAGGAC TACAACGACC TGGTGTACCT GACCGCTGAC
GAGAAATACG CCGCGATCAT CGCCGACATC AAGGAAAGCA TGAAGCTGGG CCGTCCGGTG
CTGGTAGGTA CCGCGACCAT TGAAACTTCC GAGCACATGT CCAACCTCCT GAAAAAGGAA
GGGATCGACC ACAAGGTGCT CAACGCCAAG TATCACGAGA AGGAAGCCGA GATCATCGCG
CAAGCAGGCG CGCCAGGTGC ACTGACCATC GCCACCAACA TGGCTGGCCG TGGTACCGAC
ATCCTGCTGG GCGGTAACTG GGAAGCCGAA GTGGCTGCCC TGGAAAACCC GACAGCCGAG
CAGATCGCCC AGATCAAGGC CGACTGGCAG AAGCGTCACC AGCAAGTGAT CGAGACGGGT
GGCCTGCATG TAATCGCTTC CGAGCGCCAC GAATCGCGCC GTATCGACAA CCAGCTGCGT
GGCCGCTCCG GTCGTCAGGG CGACCCGGGT TCCAGCCGCT TCTACCTGTC GCTGGAAGAC
AGCCTGATGC GCATCTTCGC CTCTGACCGG GTGAAGAACT TCATGAAGGC ACTGGGCATG
CAGTCGGGCG AGGCCATCGA GCACCGCATG GTCACCAACG CTATCGAGAA AGCCCAGCGC
AAGGTCGAAG GCCGCAACTT CGACATTCGT AAGCAATTGC TCGAATATGA CGACGTCGCC
AACGAGCAGC GCAAGGTGAT CTACCACATG CGCAACAGCC TGCTGGCCGC CGAGAACATT
GGCGACACCA TCGTCGAATT CCGCAAGGAA GTACTGGACG CTACCATCAG CCAGCACATT
CCGCCGCAGT CGCTGCCAGA GCAGTGGGAC GTAGCCGGCC TGGAGGCTTC GCTGGCCAGC
GATTTCGCCA TCAAGTTGCC GATTCAGCAA TGGCTCGACG AGGACGATCA CCTCTACGAA
GAGACCTTGC GCGAGAAGCT GCTGAGCGAG ATCACCACTG CCTACACCGA GAAGGAAGAC
CAGGCCGGTC TCGACGCCCT GCGAACCTTC GAGAAGCAGA TTCTGCTGCG CGTACTGGAC
GACCTGTGGA AAGACCACCT GTCGACCATG GACCACCTGC GTCACGGTAT TCACCTGCGT
GGTTATGCGC AGAAGAACCC GAAGCAAGAG TACAAGCGCG AGTCGTTCAG CCTGTTCCAG
GAGCTGTTGG AGTCGATCAA GCGCGACACC ATCCGCGTGC TGTCGCACGT ACAGGTTCGC
CGCGAAGACC CGGCCGAAGA AGAAGCCCGC CTGCGCCGCG AAGCCGAAGA GCTGGCGAGT
CGCATGCAAT TCCAGCACGC CGCTGCACCG GGCCTGGAAA GTGAGCAACT GAGCGAGGAG
GGTGCCGAAG TAGCGGTAGC CTCGGCGCCA GTACGCAATG ACCAGAAGCT GGGCCGCAAC
GAGCCGTGCT GGTGTGGTTC GGGCAAGAAG TTCAAGCATT GCCATGGTCA GATCGAGTGA
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| Protein sequence | MLVRMRPMGC TGDSWGRPPS LRVEDPADMF APLLKKLFGS KNEREVKRML KTVSIVNAFE
EKMVALSDEQ LRGKTAEFKE RLAKGETLDQ LLPEAFAVAR EAGKRVMGMR HFDVQLIGGM
TLHEGMIAEM RTGEGKTLVG TLAVYLNALS GKGVHVVTVN DYLARRDANW MRPLYEFLGL
SVGIVSAFQP PEEKRAAYAA DITYGTNNEF GFDYLRDNMA FSQDEKFQRE LNFAVIDEVD
SILIDEARTP LIISGQAEDS SKLYIEINRL IPRLTQHIEE VEGQVTQEGH FTIDEKSRQV
ELNEAGHQFI EEMLAQAGLL AEGESLYSAH NLGLLTHVYA GLRAHKLFHR NVEYIVQDGQ
VLLIDEHTGR TMPGRRLSEG LHQAIEAKEN LNIQAESQTL ASTTFQNYFR LYTKLSGMTG
TADTEAFEFQ SIYGLNVMVI PPNKPLARKD YNDLVYLTAD EKYAAIIADI KESMKLGRPV
LVGTATIETS EHMSNLLKKE GIDHKVLNAK YHEKEAEIIA QAGAPGALTI ATNMAGRGTD
ILLGGNWEAE VAALENPTAE QIAQIKADWQ KRHQQVIETG GLHVIASERH ESRRIDNQLR
GRSGRQGDPG SSRFYLSLED SLMRIFASDR VKNFMKALGM QSGEAIEHRM VTNAIEKAQR
KVEGRNFDIR KQLLEYDDVA NEQRKVIYHM RNSLLAAENI GDTIVEFRKE VLDATISQHI
PPQSLPEQWD VAGLEASLAS DFAIKLPIQQ WLDEDDHLYE ETLREKLLSE ITTAYTEKED
QAGLDALRTF EKQILLRVLD DLWKDHLSTM DHLRHGIHLR GYAQKNPKQE YKRESFSLFQ
ELLESIKRDT IRVLSHVQVR REDPAEEEAR LRREAEELAS RMQFQHAAAP GLESEQLSEE
GAEVAVASAP VRNDQKLGRN EPCWCGSGKK FKHCHGQIE
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