| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4347 |
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| Symbol | |
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| ID | 5191271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4862854 |
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| End bp | 4864200 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588824 |
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| Product | benzoate transport |
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| Protein accession | YP_001269654 |
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| Protein GI | 148549552 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0793736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0224677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG CGCAAACCAA CGTCGGCAAA AGCCTCGACG TTCAGTCGTT CATCAATCAG
CAGCCGCTGT CCCGCTATCA GTGGCGAGTC GTGCTGCTGT GCTTTCTGAT CGTCTTCCTT
GATGGCCTGG ACACTGCTGC CATGGGTTTC ATCGCCCCGG CACTGTCGCA AGAGTGGGGA
ATCGACCGCG CCAGCCTTGG GCCGGTCATG AGTGCCGCGT TGATCGGCAT GGTGTTCGGC
GCCCTGGGCT CCGGGCCCCT GGCTGACCGT TTCGGCCGCA AAGGCGTGCT GGTGGGGGCG
GTGCTGGTAT TTGGTGGTTT CAGCCTGGCC TCGGCCTATG CCACCAACGT CGACCAGTTG
CTGGTACTGC GCTTCCTGAC TGGCCTGGGC CTGGGTGCAG GCATGCCCAA CGCTACCACG
CTGTTGTCCG AATACACCCC GGAGCGCCTC AAGTCGCTGC TGGTGACCAG CATGTTCTGT
GGCTTCAACC TGGGCATGGC GGGTGGTGGC TTCATTTCCG CCAAGATGAT CCCGGCCTAC
GGCTGGCACA GCCTGCTGGT CATCGGTGGC GTGCTGCCGT TGCTGCTGGC GCTGGTGCTG
ATGGTCTGGC TGCCGGAGTC GGCGCGGTTC CTGGTGGTGC GCAACCGCGG CACCGACAAG
GTGCGCAAGA CCTTGTCGCC AATCGCCCCG CAAGTGGTGG CCGAGGCAGG CAGTTTCAGT
GTGCCTGAGC AAAAGGCGGT GGCTGCGCGC AACGTGTTCG CGGTGATCTT CTCTGGCACC
TATGGCTTGG GCACCGTGTT GCTGTGGCTG ACCTATTTCA TGGGCCTGGT GATCGTCTAC
CTTCTGACCA GCTGGCTGCC AACCCTGATG CGTGACAGCG GCGCGAGCAT GGAGCAGGCG
GCGTTCATCG GTGCGCTGTT CCAGTTTGGC GGCGTGCTGA GTGCAGTCGG CGTGGGTTGG
GCCATGGACC GTTTCAACCC GCACAAGGTG ATTGGCATTT TCTATCTGCT GGCCGGGGTG
TTCGCCTACG CAGTGGGGCA GAGCCTGGGC AACATCACCT TGCTAGCTAC GTTGGTACTG
GTTGCCGGTA TGTGTGTGAA CGGTGCGCAG TCGGCAATGC CATCTCTGGC GGCGCGCTTC
TATCCCACTC AGGGCCGTGC CACAGGTGTA TCGTGGATGC TGGGTATTGG CCGCTTTGGT
GCGATTCTTG GGGCCTGGAG TGGTGCAACG CTGCTTGGCC TGGGCTGGAA CTTCGAGCAG
GTGCTGACGG CGTTGCTGGT GCCGGCAGCG CTGGCGACTG TGGGTGTGGT CGTCAAGGGG
CTGGTCAGCC ACGCCGACGC AACCTGA
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| Protein sequence | MNQAQTNVGK SLDVQSFINQ QPLSRYQWRV VLLCFLIVFL DGLDTAAMGF IAPALSQEWG
IDRASLGPVM SAALIGMVFG ALGSGPLADR FGRKGVLVGA VLVFGGFSLA SAYATNVDQL
LVLRFLTGLG LGAGMPNATT LLSEYTPERL KSLLVTSMFC GFNLGMAGGG FISAKMIPAY
GWHSLLVIGG VLPLLLALVL MVWLPESARF LVVRNRGTDK VRKTLSPIAP QVVAEAGSFS
VPEQKAVAAR NVFAVIFSGT YGLGTVLLWL TYFMGLVIVY LLTSWLPTLM RDSGASMEQA
AFIGALFQFG GVLSAVGVGW AMDRFNPHKV IGIFYLLAGV FAYAVGQSLG NITLLATLVL
VAGMCVNGAQ SAMPSLAARF YPTQGRATGV SWMLGIGRFG AILGAWSGAT LLGLGWNFEQ
VLTALLVPAA LATVGVVVKG LVSHADAT
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