| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4322 |
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| Symbol | |
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| ID | 5193764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4834626 |
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| End bp | 4835960 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588799 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001269629 |
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| Protein GI | 148549527 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.713581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATT CGGTGATCGT CGTCGATGAT GAAGCCAGTA TCCGCACTGC TGTCGAGCAA
TGGCTGAGCC TGTCTGGCTT CAGCGTGCAG TTGTTCGCTC ACGCCGAAGC GTGCCTGGCA
CACCTGCCGC AGCACTTCCC TGGGGTGATC ATCAGCGATG TGCGCATGCC GGGCATGGAT
GGCCTGCAAT TGCTCGAACG CCTGCAGGCG AACGACCCCG ACCTGCCCGT GATTCTGCTG
ACCGGTCACG GTGATGTACC GATGGCGGTA GAAGCCATGC GCATGGGGGC CTATGACTTC
CTGGAAAAAC CCTTTACGCC GCAAGACTTG CTGGGCAGCC TGCGCCGCGC CCTGGAAAAG
CGCCAGCTGG TGCTTGAGAA CCGCCGGCTC CACGAGCAGG CCGACCTCAA GTCACGCCTG
GAAGTCACGC TACTGGGCAT GTCCCAGGGC CTGCAACAGC TGCGCCGGCA AGTGCTGGAC
CTGGCCGGCC TGCCGGTGAA CGTGCTGATT CGCGGTGAAA CCGGCAGTGG CAAGGAGCGG
GTGGCCCGCT GCCTGCACGA CTTTGGCCCC CGTGCCGCCA AGCCCTTTGT AGCCCTCAAC
TGCGCAGCCA TCCCCGAGTC GTTGTTCGAG GCCGAACTGT TCGGCCATGA GAGCGGCGCC
TTCACGGGCG CCCAGGGTAA ACGGATCGGC AAGCTGGAAT ATGCCAACGG TGGCACCGTG
TTCCTCGACG AAATCGAGAG CATGCCACTG GCCCAACAGG CCAAGCTGTT GCGGGTGATA
CAGGAGCAGA AGCTGGAGCG CCTGGGGGCC AACCAGAGCA TCAGCGTGGA CCTGCGCATC
ATTGCTGCGA CCAAGCCCGA CCTGCTCGAG GAGGCGCGTG CCGGGCGCTT CCGCGAAGAC
CTGGCCTACC GCCTGAACGT GGCCGAATTG CGCCTGGCAC CGCTGCGCGA GCGGCGGGAG
GACATACCGC TGCTGTTCGA ACACTTTGCC CGTGCTGCAG GTGAAAAGCT GGGTCGCACC
GCCCCGCCGC TATCGGCTGC ACAGCTGGCG CAGCTGCTGT CACATGACTG GCCTGGCAAC
GTGCGTGAGC TGGCCAATGC GGCGGAGCGG CATGCGCTGG GGCTGGGTTC GCCAAACATC
GAGGTGGCAC CTGCCGGGCA GTCGCTGGGC GAGCAGATGG AAGCATTCGA AGCGCAATGC
CTGCGTGCGG CCTTGCGTCA GCATGGGGGC GAGATCAAGT CGGTGATGGA GGCGTTGCAA
CTGCCGCGGC GCACCCTTAA CGAGAAGATG CAACGGCATG GGCTGGTGCG CGAGGATTTT
GTTGGGCAGG AATGA
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| Protein sequence | MLNSVIVVDD EASIRTAVEQ WLSLSGFSVQ LFAHAEACLA HLPQHFPGVI ISDVRMPGMD
GLQLLERLQA NDPDLPVILL TGHGDVPMAV EAMRMGAYDF LEKPFTPQDL LGSLRRALEK
RQLVLENRRL HEQADLKSRL EVTLLGMSQG LQQLRRQVLD LAGLPVNVLI RGETGSGKER
VARCLHDFGP RAAKPFVALN CAAIPESLFE AELFGHESGA FTGAQGKRIG KLEYANGGTV
FLDEIESMPL AQQAKLLRVI QEQKLERLGA NQSISVDLRI IAATKPDLLE EARAGRFRED
LAYRLNVAEL RLAPLRERRE DIPLLFEHFA RAAGEKLGRT APPLSAAQLA QLLSHDWPGN
VRELANAAER HALGLGSPNI EVAPAGQSLG EQMEAFEAQC LRAALRQHGG EIKSVMEALQ
LPRRTLNEKM QRHGLVREDF VGQE
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