| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4272 |
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| Symbol | |
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| ID | 5195432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4774378 |
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| End bp | 4778904 |
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| Gene Length | 4527 bp |
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| Protein Length | 1508 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588749 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001269580 |
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| Protein GI | 148549478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC TCTCGCAGTT ACCGCCTGTT CGCCCGGATA CCTTGCGCTG GGCAATCTTC
CTCGCCGTGC TCGGGCCCAG CGCCGCACTG GCTCAGACCG GGCTGGAAGC AGCCAGCGGC
CCCGGGGGGA CCCCGGTCAT CCACAATGGC CACGGGGTGC CGGTGATCGA CATCGTGCCG
CCCAACGCCA AGGGGCTGTC ACACAACCAG TTCATCGACT ACAACGTGGC CACCCCTGGC
CTGGTGCTGA ACAACGCCAC CGCAGCCGGG CAGTCGCAAC TGGCCGGTGC CCTGGCGGCC
AACCCGCAAT TTCAAGGCCA GGCCGCCTCG ACCATTCTTA ACGAAGTGGT CAGCCGCAAC
GCCTCGCTGA TCGAGGGGCC GCAGGAAATC TTCGGGCGCC CGGCCGACTA CATACTGGCC
AACCCCAATG GCATCACCCT CAATGGCGGC AGTTTCATCA ACACCACCCG CGCAGGCTTC
GTGGTGGGCA CCCCGCAATT CGAGGAGCAA CAGCTCAGGT ACCTCGATAC GCTCACGGCC
AGTGGCACCC TGCAGGTACT GGAGCATGGC CAGGGCAATG CCGGTGGCGC ACTCGATCTG
ATCGCACCAC GCGTGGACAG CAAAGGCCTG CTCATGGCCA GCGAAACGCT CGACATCACC
GTCGGTCGCA ACCGTATCGA CAGCCGCAGC GGCGAGGTGG TCGAACACCT GCCCAGCCCC
TCGTCGAGCA TTGATGCCAG CCTGTTCGGC GCCATGCGCG CCGGGCGTAT CCGTGTGGTA
AGTACCGCCG AAGGCGCGGG TGTGCGTGTG GGGGCCTCGC AGATTCTGGG CGCCGAGGGG
GTCGACATCA GCTCGGCCGG GGGCCTGCAT GTCAGTGGCA GTGGCGACCG CCCGACCGAG
CTGCGCAGCG AGCGCGGCGT GCTGAAACTC ACCGCTGCCG ATGACCTGAT GCTTGAAACG
GTCGACGGCC AGGCCCCGCG AATCGAAGCA AGGGCGGGCA AGAAACTCAC ACTGGACGCC
AAGACAATCG AGCACATCAA GCACGACAGT GACAGCTGGA ACAAGAAGTT CTGGTTCGTC
ACCCGCGAAA CCTACAACAG CAAAACCACC ACCACCCACC AGCAGCAACA GGGCAGTCAA
TTGCTGGGCA CTGACAGCGT GCTGTTGCAG TCCGGCGACG ACATGCGCAT GACCGCAGCG
AAGGTGGACG CCGGTAGCGA GCTGATGGTC GACAGCGGTG CCGGCCTGGA CATCCTCGCC
GGCATCGACA GCAAACGCAC CGAACAGCAG GTGCGTCATC GCAAGGATTT ATGGCGCGGT
GACAGCGATA GCGACCAGCT CAAGGAAACC GCAAAGGGCA GTACCCTGAG CGCCGGGCAC
ATGTCGATAA AGGCAAGCGA CAACCTCAAC GTGCAGGGCA GCAGCCTGCA CAGCCGCGGC
GATCTGGCTA TCCAGGCAAA ACAGGCCGAC ATCGGCACCA CCACCTTGCA GGAACACGGT
ACCCAACGCG ATTACCGAGG CGACCTGGTA TCCGGTACAT TCTTTGGCGA TCGAAAAGGT
AACGACACCG AGGGCCAGGT CGTCGCGGGC AGCACCATAA CCAGCGATGG CGAGCTCACA
GTCAGAGCCG ACCAGGTCGC CATCAAAGGC AGTACCGTGT TCGGTAAAAA GGACGCGGTG
CTCTACAGCG AGAACGGTTC GCTGGCCATC GAGGCGGACC ATGGCAGCAC GACCTCCACC
CAGCGCACCA GTGACAGTAA GCTGTTCGGC CTGATCGGCA GCACGCACGA AAGCACGGAC
CGCAAACAGC AGGTACTGGT CAGCGACGTC AGCTCGACCA GCAACCTGCG CCTGGCCAGC
GCCGAAGAGA TGCGCATCCA GGGCGCCAAG GTTGCCGCTG GCAAGCATCT TCAAGTCGAG
GCCAAAGGCG ACCTGCTGAT TGGCAGTGCG CAATCGGTCG ATGAACGCGA AACCCGCGAC
CAACAACGGG GTTTCACGGC CAGCGCCAGA CAGACCCAGG AAGCCGAGGA TGGCAAGCCC
GAGTCTCGCC AATACGCGGC TGGCGTGGCG TATGAGGTCG TGACCACCAC CAGCAAGCAG
CGCGCGACCA GCCAGGTTGC CAGTGAGCTC AAGGGTGCCT CGGTGGGCAT GAGCAGCAGC
GCGCACCTGC AGGTCAACGG CAGCAAGGTC CAGGCCACTG CCGGCGACCT CGATGTGCAG
GCGCGGGAAG TGACACTGGG GGCGACCCGC AACGACCGTG ACGTAGTCAC CAGCACCACC
GAAAGTGGTG GCGGGCTGAC GGTAACCGGT GGCATCGACC GCCTGGGCAG TTTGTTCGAA
GGCCATCACA ACCGCGAGGT GCAAGCCGAA CGCGAAAGCA AGGTGCAGCG CAGCGAGTTG
CAGGCCAGCG GCGATCTGAA ATTGCGCAGT GATGCACTGC TCACCGAGGC CGTGCACGTC
GAGGCCGGCA ACACCCTGCA GGTGACCGCC GAACGCATCG ACAACCGTGC AGTGCAGGAT
ACCCATGAAC ATGAACAAAG CCGTGACGAC TGGTCGGGTA GCCTGGGCGC CAGTATCGAA
TACCGCGACC TGACCCGCCC TATCGAACGC CTGGTGCTGG GTGAGGAAGC CGCGCGCTTC
CAGCAAGCCT CGCCCGAAGA CGCCATGGCA CCGCCCAGCG TGGGTGCCGA CATGACGGTT
GAACACCTCA AGCGCCTGGA AAACCAGCGC CGTGGCATTG CTCAGGTCAG CGAGTTGTCC
GCAGCAAAGG TCGAGGTCAA GGCTGACACA CTGGCCGACC AGGGCACAGC CTGGCGGGCC
AATGCCGGCT CGCTGAAAAT CGAGGCGCAG CAGCACCAGG TGAGCGCCGC CGAAAATACC
CAGGAAACCA CCGTTCAACG CCTGGCCTAT GGTGGCGACG CGCGCCTGGA CACCAGCACC
GGCGAGGACT TGAATGTACG CGCCGCCGGC AAAGGAGGCT CGCTGGATAA AAAGGATATC
GCCAGCACCG CCGTGCCCGG CAGCCTTTAC GGGCAACAGG GTATCCAGGT ACAGCTGGGC
AGCGATGGCC GCTACGAAGG GGCCCGCATC GATGGCGGTG AAGGCAGCGT GGTCATGCAC
AGTGCAGGGT CGTTGGCCCT ACCCCAGGCG ACCGACCAGG CCGAACAGCA GTCACGCCAG
CTCGATGGCA ATGCCTGGGC CAAAGTCGGC AACCGCCCGG GCAGCACCGG CGTCGATGGT
CGGGGCTATC TGGACCATGG CCAGAAGCTG AGCACGCAGA GCAAGGCACA AGTGGCACAA
ATCGACGCCA AGGGCGAAGT TCAACTGACC AGCACAGGCG ACCTGTTGCT CGAAGGCACC
CGCATTGGCA ACCGCGAGGC CAAGGCCGGC GACATACGGG TGCTAAGCGG CGGCCAGTTG
CAGGTCAAGG CGGCCAGCAA CACCCAGCAG GCCACAGGTG CCAACCTGGG TGGCGGCATG
GAGCTGGCGG CCAAGGCTGG CCAGACCCAG GGGGGAGCCA TAGGCGGCCA CTTCAGCCAC
GGCAAGCAGG ACGAACATGC ACGTCAGGCG GTCGATGCCC AGTTTGCCAG CAACGGCACA
CTGACCCTGA CCAGCAGCGC CCGCGAGGAC ATCGCCCTGC ACCTGCAAGG CCTGCAGGCC
TCGGCCGAAC AGATCACCCT CGACGCCTCG AATGGCGGCA TGCTGGTTGA AGCCTCTTCC
AGCCAGGAGC GACGCGACAA CCTCGACATC TCGGCCGGCG CCGGTTTCAA CATGGCCAAG
GGCGCGTTGG ACACCCGCGG CCTGCATGGC CGGCTCAAGG TAGAGCTCGA CAAGCGCGAC
AACCTCACCT GGAATACCAG TGACCTGCGC GCCGAGCGCA TCGACCTGCA AAGCCGCGGC
GATACCCGCA TCGAGAGTGC CACCCTGGAT GCAGGGCATA TTGGCGGCAC AATCGACGGT
GACCTGCGCA TCGCCAGCCT CAAGGACAAC GTCAACACCC TGAGCGTGAA GGGTGATGTC
AGGCTGAGCC AGGAGAAAAA CCCGCAGGGC TATGTCAACG CGGCCAAATC GGTGGCAGGG
CCGCTGGGAG GCAAGGTCGA GAAAACGGCC GGTTCTGCCC TGAGCAAGGC AGACCCAGGG
TTCTCGCCGA CCGTCAGCCT CGACGTGTCG CATGCACAGC GCGACAACGT GGCGCGTCAG
ACCACGCTTA AAAGCAGCGA CGGCATCGAC CTGCAGGTCG GTGGCAACGC TCATCTGGTA
GGGGCACGCC TGCAGTCGGC CAAAGGCGAC GTGAGGCTCG ACGCCAACTC GGTCACCCAG
GAAACGCTAA GCGGTAATGA CTATCGCCGA GACCTGTCGC TCGATGCGTC CAACTCACCG
GTGGATCTGG GCACCGCAAT CGCCGAGATA GCCAAAAGCA AAATGGCGGC GGATGGGGAA
AATGCGCTGG ACCTGGGTGT GTTGAGAACC AGTGGGCATA GTCGCAGCGA GCAATGGGCT
TCGAGCATGC AAGGGAAGAA GCACTAA
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| Protein sequence | MQTLSQLPPV RPDTLRWAIF LAVLGPSAAL AQTGLEAASG PGGTPVIHNG HGVPVIDIVP
PNAKGLSHNQ FIDYNVATPG LVLNNATAAG QSQLAGALAA NPQFQGQAAS TILNEVVSRN
ASLIEGPQEI FGRPADYILA NPNGITLNGG SFINTTRAGF VVGTPQFEEQ QLRYLDTLTA
SGTLQVLEHG QGNAGGALDL IAPRVDSKGL LMASETLDIT VGRNRIDSRS GEVVEHLPSP
SSSIDASLFG AMRAGRIRVV STAEGAGVRV GASQILGAEG VDISSAGGLH VSGSGDRPTE
LRSERGVLKL TAADDLMLET VDGQAPRIEA RAGKKLTLDA KTIEHIKHDS DSWNKKFWFV
TRETYNSKTT TTHQQQQGSQ LLGTDSVLLQ SGDDMRMTAA KVDAGSELMV DSGAGLDILA
GIDSKRTEQQ VRHRKDLWRG DSDSDQLKET AKGSTLSAGH MSIKASDNLN VQGSSLHSRG
DLAIQAKQAD IGTTTLQEHG TQRDYRGDLV SGTFFGDRKG NDTEGQVVAG STITSDGELT
VRADQVAIKG STVFGKKDAV LYSENGSLAI EADHGSTTST QRTSDSKLFG LIGSTHESTD
RKQQVLVSDV SSTSNLRLAS AEEMRIQGAK VAAGKHLQVE AKGDLLIGSA QSVDERETRD
QQRGFTASAR QTQEAEDGKP ESRQYAAGVA YEVVTTTSKQ RATSQVASEL KGASVGMSSS
AHLQVNGSKV QATAGDLDVQ AREVTLGATR NDRDVVTSTT ESGGGLTVTG GIDRLGSLFE
GHHNREVQAE RESKVQRSEL QASGDLKLRS DALLTEAVHV EAGNTLQVTA ERIDNRAVQD
THEHEQSRDD WSGSLGASIE YRDLTRPIER LVLGEEAARF QQASPEDAMA PPSVGADMTV
EHLKRLENQR RGIAQVSELS AAKVEVKADT LADQGTAWRA NAGSLKIEAQ QHQVSAAENT
QETTVQRLAY GGDARLDTST GEDLNVRAAG KGGSLDKKDI ASTAVPGSLY GQQGIQVQLG
SDGRYEGARI DGGEGSVVMH SAGSLALPQA TDQAEQQSRQ LDGNAWAKVG NRPGSTGVDG
RGYLDHGQKL STQSKAQVAQ IDAKGEVQLT STGDLLLEGT RIGNREAKAG DIRVLSGGQL
QVKAASNTQQ ATGANLGGGM ELAAKAGQTQ GGAIGGHFSH GKQDEHARQA VDAQFASNGT
LTLTSSARED IALHLQGLQA SAEQITLDAS NGGMLVEASS SQERRDNLDI SAGAGFNMAK
GALDTRGLHG RLKVELDKRD NLTWNTSDLR AERIDLQSRG DTRIESATLD AGHIGGTIDG
DLRIASLKDN VNTLSVKGDV RLSQEKNPQG YVNAAKSVAG PLGGKVEKTA GSALSKADPG
FSPTVSLDVS HAQRDNVARQ TTLKSSDGID LQVGGNAHLV GARLQSAKGD VRLDANSVTQ
ETLSGNDYRR DLSLDASNSP VDLGTAIAEI AKSKMAADGE NALDLGVLRT SGHSRSEQWA
SSMQGKKH
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