Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4240 |
Symbol | |
ID | 5190540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4743949 |
End bp | 4745373 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588717 |
Product | gamma-aminobutyraldehyde dehydrogenase |
Protein accession | YP_001269548 |
Protein GI | 161936354 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGC AGATGCTGAT CAATGGCCAG CTAGTCGCTG GCCAAGGCCC GGCCTGGACC GTGCTCAACC CGGCGCTGGG CACTGCCCTG GCGCAGATCA ACGAAGCCAC CGAGGCACAG GTAGACAGCG CCGTACGCGC TGCCGACCAA GCCTTCGACA GCTGGTCGCA AACCAGCCCT AAAGAACGTT CGCAGGCCTT GCTGGCGCTG GCCGACGCCA TCGAAGCCCA TGCCGATGAA CTGGCCCGGC TGGAATCGCA GAACTGCGGC AAGCCCCTGA GCGCTGCCCT GAATGACGAG ATCCCGGCGA TTGCCGACGT GTTCCGTTAC TTTGCCGGTG CTGCGCGCTG CCTGGGCGGC TCGGCGGCAG GCGAGTACCT GCCGGGCCAC ACCTCGATGA TCCGGCGCGA TCCGTTGGGC GTGGTGGCGT CCATCGCGCC GTGGAACTAC CCGCTGATGA TGCTCGCCTG GAAGATCGCC CCGGCCCTGG CTGCCGGCAA CACGGTGGTG ATAAAACCAT CCGAACTGAC GCCACTGACG GCCCTGCGCC TGGGCGAGCT GGCCCAGGAC TTGCTGCCGC CGGGGGTGCT GAACATTCTC TTCGGCCGCG GCCAGACCGT CGGCAACCCG CTGGTCAGCC ATCCAAAGGT GCGCATGGTG TCGCTGACCG GCTCGATCCC CACTGGCGCG CACATCATCA GCGCCACCGC CGACAGCGTG AAACGCATGC ACATGGAGCT GGGCGGCAAG GCGCCGGTGC TGGTGTTCGA TGACGCAGAC ATCGATGCCG CCATCGACGG CATCCGCACC TTCGGCTTTT ACAACGCCGG CCAGGACTGC ACCGCAGCCT GCCGCCTGTA CGTACAGGAC GGGATCTACG AGCGCTTCGT CGAGCGCCTG GGTGCAGCAG TGGCGAGCCT GAAACCTGGC CTGCAAGAGG CCGAGGACAC CGAGCTGGGG CCATTGATCA GTGCCCAGCA CCGCGACAAG GTGGCCGGGC TGGTGCAGCG GGCCATCGCC CAGCCACACA TTCGCCTGGT GACGGGTGGC AAGGCAATTG ATGGCGAGGG TTTCTACTTC GAGCCGACCG TGCTGGCCGA CGCCCTGCAG GACGACGAGA TCGTGCGCAA CGAAGTGTTC GGCCCGGTGG TTTCGGTCAC ACGCTTCACA GACGAAGCGC AGGCGCTGGA ATGGGCCAAC GACTCCAACT ACGGCCTGGC CTCATCGGTA TGGACCCGCG ACACCGGCCG CGCCCACCGC CTGGCGGCGC GCTTGCAGTA TGGCTGCACC TGGGTGAATA CCCACTTCAT GCTGGTCAGC GAAATGCCCC ATGGCGGGCA GAAGCATTCG GGGTATGGCA AGGACATGTC GATGTATGGG CTGGAGGACT ACACCTGTGT GCGGCATGTG ATGATCAAGC ACTAA
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Protein sequence | MQTQMLINGQ LVAGQGPAWT VLNPALGTAL AQINEATEAQ VDSAVRAADQ AFDSWSQTSP KERSQALLAL ADAIEAHADE LARLESQNCG KPLSAALNDE IPAIADVFRY FAGAARCLGG SAAGEYLPGH TSMIRRDPLG VVASIAPWNY PLMMLAWKIA PALAAGNTVV IKPSELTPLT ALRLGELAQD LLPPGVLNIL FGRGQTVGNP LVSHPKVRMV SLTGSIPTGA HIISATADSV KRMHMELGGK APVLVFDDAD IDAAIDGIRT FGFYNAGQDC TAACRLYVQD GIYERFVERL GAAVASLKPG LQEAEDTELG PLISAQHRDK VAGLVQRAIA QPHIRLVTGG KAIDGEGFYF EPTVLADALQ DDEIVRNEVF GPVVSVTRFT DEAQALEWAN DSNYGLASSV WTRDTGRAHR LAARLQYGCT WVNTHFMLVS EMPHGGQKHS GYGKDMSMYG LEDYTCVRHV MIKH
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