| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4129 |
|---|
| Symbol | |
|---|
| ID | 5192952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4633185 |
|---|
| End bp | 4633979 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640588606 |
|---|
| Product | IstB ATP binding domain-containing protein |
|---|
| Protein accession | YP_001269437 |
|---|
| Protein GI | 148549335 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.695799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCTG AAAAAGTGGT CCACCTGTCC AGCATTGCCG GTCCGCAGGT GACCTCCATG
GCCATATGCG AAGAGCATGG CCCGTATGAG GCAACCACCC ACCAGGTGCT CAGCCACACC
TTCCGCTCGC CGTGCCCGGG CTGCAAGGCG GCGCAGGTCG CCAAAACCCA GGCCGAAGAC
ACTAAGCGTC AGCGCGTGGA TCTGGCGTAC AAGCTCGGCG ACTCGCTGAT CCCAAAGCGG
TTCAAGGACA AGACGTTCGA CAGCTATGCG GCGACCTGCG AAGGCCAGCA CAAGGCCAAG
GCGCGCTGCG AGCGTTACGC CGCCGAGTTC GATTCCAATC TGGCCGCCGG GCGCTGCCTG
ATCCTAGTGG GTAACCCCGG TACCGGGAAA ACGCACCTGG GTGTGTCGAT CGCCCAAGCC
GTCATGGCCA CCACCACGCA TACGGCAGCC TATCGGACCC TCGGCGGAAT CCTGCAGGCC
ATCCGCGCCA CGTTCGATGG CAGTTCCGGC CAGACCGAGG GGAGCATCCT CGACGCGTTG
ATTCGGCCGT CGCTGTTGGT CTTGGATGAG GTCGGCGCGA GCAAGGAGGC GCCGAGCGAT
TTCGAACTGA GCCGTCTGTT CTCGATCATC AACGGCCGCT ACGAGCGGAT GCTGCCGACC
ATCGTGATTT CCAATCTTGG TGCGAAAGAG CTTCCGGCGG CAATGGGCGA GCGTTCGGCG
GACCGCTTGC GGGAGGGTGG GGGCATCGTC CTTCCGTTCG ATTGGTCGTC GCACCGTGGC
CGGGAGGGCA TCTGA
|
|---|
| Protein sequence | MRSEKVVHLS SIAGPQVTSM AICEEHGPYE ATTHQVLSHT FRSPCPGCKA AQVAKTQAED
TKRQRVDLAY KLGDSLIPKR FKDKTFDSYA ATCEGQHKAK ARCERYAAEF DSNLAAGRCL
ILVGNPGTGK THLGVSIAQA VMATTTHTAA YRTLGGILQA IRATFDGSSG QTEGSILDAL
IRPSLLVLDE VGASKEAPSD FELSRLFSII NGRYERMLPT IVISNLGAKE LPAAMGERSA
DRLREGGGIV LPFDWSSHRG REGI
|
|---|
| |