Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4127 |
Symbol | |
ID | 5194043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4632464 |
End bp | 4632892 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588604 |
Product | VRR-NUC domain-containing protein |
Protein accession | YP_001269435 |
Protein GI | 148549333 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.649102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC CCGCCATTCG CCCGTTCAGG GCCAAGCCGA CTCGCGCCAA GCCCGTCGAC CGGGAAGGGC AGGAGCAGGC CGCGCTGATG CAGGAGCTGC AACTGCGCTA TCCGCAGGCC TACAAGCTGA TCTACCACGT CCCGAACGGC GGGCACCGGG TCAAGGCGGT GGCTGCCAAG CTGAAGGGGC AGGGCGTGAA GGCCGGTGTG CCTGACCTGG TGCTGCCCAT GGCGCGAGGT GGCTATTTCG GCCTATACAT CGAGTTCAAG GCCATGCCGC CCTATGACGC GCCGGTATCT CCGAGCCAGG ATGCCTACCT GCAGGCGCTT GCCGATCAGG GCTACCTAGC GATCGTGTGC CGGGGCAACA TCGACGCCGT CGAGGCCATC CGTGCCTACC TGCTGCAACC CGCCACGGTG GCTGCATGA
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Protein sequence | MNSPAIRPFR AKPTRAKPVD REGQEQAALM QELQLRYPQA YKLIYHVPNG GHRVKAVAAK LKGQGVKAGV PDLVLPMARG GYFGLYIEFK AMPPYDAPVS PSQDAYLQAL ADQGYLAIVC RGNIDAVEAI RAYLLQPATV AA
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