| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4118 |
|---|
| Symbol | |
|---|
| ID | 5190343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4628389 |
|---|
| End bp | 4628694 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640588595 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001269426 |
|---|
| Protein GI | 148549324 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1403] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.541887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGC TCAATATCCT GAAGCAGAAC GTGACGATGC TGCCGGCTAC CCCGGTCGCC
CAGGTCAATG AGGCTCAATG GGGTGCTGGT CGTGGTGGTC GACCGTGGCG CCGCATTCGG
GATCGGATCC TGTTGCGGGA TCAGTACACC TGCCGGGCCT GCGGCCTGGT CACAAAAGAC
CTTGAGGTCG ACCACATCAT CAACGTCGCC GAGGGCGGCT CGGATGATGA CAGCAACCTT
CAGGCCCTGT GCGTGCCGTG CCACCAGGAG AAGACTGCAG CTGAGGCGGC TAGAGGTCGT
CGATAG
|
|---|
| Protein sequence | MARLNILKQN VTMLPATPVA QVNEAQWGAG RGGRPWRRIR DRILLRDQYT CRACGLVTKD
LEVDHIINVA EGGSDDDSNL QALCVPCHQE KTAAEAARGR R
|
|---|
| |