Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4115 |
Symbol | |
ID | 5191708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4624070 |
End bp | 4626019 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588592 |
Product | peptidase U35, phage prohead HK97 |
Protein accession | YP_001269423 |
Protein GI | 148549321 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAG CCTACAGCCT CCTTGAGATC AAGGCGGTGG ACGATGACGC GCGGGTGATT ACTGGCATTG CCACCACGCC TGCGCCTGAC CGCATGGATG ATGTGGTTGA GCCCAAGGGC GCGCAATTCA AATTGCCGAT CCCTTTCCTG TGGCAGCACA ACCACGATCA GCCAGTCGGG CAGGTGACCA AGGCCACCGT GACTGACGCA GGAATCGAAG TCACGGTGGA ACTGGCCAAG GTCGACGAGC CCGGCACCTT GAAGGACAGG CTCGATGAAG CCTGGCAGTC GATCAAAGCC AAGCTGGTCC GTGGCCTTTC CATCGGCTTT TCGCCGATCG AGTCGGCGAA CATCGACGGC AGCTGGGGTC GACGCTTCCT CAAGTGGGAG TGGCTGGAGC TTTCTGCCGT GACGGTGCCG GCCAACGCCG GTGCCAGCAT TCAGACCATC AAATCCATCG ACCGTGAGTT GCGCGCCGCG ACAGGCTCCA GCGCGCTCCC GGTCGTGCGC ATCACCCCTG CCGGCGCTTC GGCACCCATC ACAAAATCTG CGAAGCCCGA GGAGGGCGAC ATGAACATTC AGGAACAGAT CAAGTCCTTC GAGAGCACTC GCGGCGCCAA AGCTGCTCGT CTCGAAGCAA TCATGAGTAA GGCCGCCGAA GAGGGGCGCA CCCTTGACGC TTCCGAGTCC GAGGAATACG ACACCATCGA GGGTGAACTG AAGTCCATCG ATGGTCACTT GGGCCGTCTG CGTGGCCTGG AAAAATCCAT GGCTTCCGGC GCCAAGCCCG TTGAGCCTGG CCGCGTCAAC AACGTCTCGA AAGGCCATGA AGTGCGTGAC AACGCGGTGA TCCGTGTAGA GCGGACCCTG CCAAAAGGTA CCGCATTCAC TCGCTTCGCG ATCGCGCTGG CACGCTCGAA GGGCAACCTG ATGCAGGCCG TGGAGGTTGC CAAGGGCTGG GAAGAATCCA CCCCTGAGGT GGTAACCGTT CTGAAGGCGG CAGTCGCAGC CGGTACCACC ACTGACCCAG CTTGGGCAGC ACCGCTGGTT GAGTACCAGA CCATGGCCAG CGAGTTCATT GAGTTGCTGC GCCCACAGAC CATCATCGGC AAAATCCAAG GACTGCGCCG TGTGCCGTTC AACATCAAAA TGTCGGGGCA GACCTCCGGC TCCAGCGTGA ACTGGGTGGG CGAGGGCAAG CCCAAGCCGG TTTCGGCCCT GGCATTCGAC ACCACCACCC TGCGCTTCAC CAAGGCCGCC GGGATTGTGG TGTTGACCGA TGAACTGGTG CGATTCAGCA ACCCTAGCGC CGAGGCCCTG GTGCAGGCCG ACCTCACCGC ATCGATGGCA CAGTTCCTGG ACGTGGCATT CGTAGATCCG GCCATTGCCG AGGTGGCTGA AGTATCGCCG GCGTCCATCA CCCACGGTGT CACACCGATC GTTGCCAGCG GCACTACCGC CGATGCCCTG AAGGCTGATG TGAAGCGCCT GTTCGCAGCG TTCCTGGCCG CCAACATGAC TCCGGCTGGC GCGGTCTGGA TCATGACTCC CACCATGGCG CTGACCATCA GCATGATGAA CAACGCCTTG GGGCAGTCGG AATTCCCGGG CATTGATATG AACGGCGGCA CGTTCATGGG GCTCCCGGTG GTCGTGTCGG AAAGCGTTCC GGCCAATCCT GGCTCGGGTA GCCCGGTTAC TGGTGCAGGC CAGCGGCTGA TCTTGGCCAA GGCTTCCGAG ATCCTGTTGG CGGATGACGG CGGGGTCACC ATCGACGTGA GCCGTGAAGC CTCCCTGCAG ATGAACAGCA CTCCTACTGC CGGTGCCACT GAGCTGGTCA GCCTCTGGCA GAACAACATG GTGGCGCTGC GTGCCGAGCG CTTCATCAAC TGGAAGCGCC GTCGCCTGCA GGCGGTTGGC TACATCGACT CGGCCAATTA CGAATCCTGA
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Protein sequence | MNRAYSLLEI KAVDDDARVI TGIATTPAPD RMDDVVEPKG AQFKLPIPFL WQHNHDQPVG QVTKATVTDA GIEVTVELAK VDEPGTLKDR LDEAWQSIKA KLVRGLSIGF SPIESANIDG SWGRRFLKWE WLELSAVTVP ANAGASIQTI KSIDRELRAA TGSSALPVVR ITPAGASAPI TKSAKPEEGD MNIQEQIKSF ESTRGAKAAR LEAIMSKAAE EGRTLDASES EEYDTIEGEL KSIDGHLGRL RGLEKSMASG AKPVEPGRVN NVSKGHEVRD NAVIRVERTL PKGTAFTRFA IALARSKGNL MQAVEVAKGW EESTPEVVTV LKAAVAAGTT TDPAWAAPLV EYQTMASEFI ELLRPQTIIG KIQGLRRVPF NIKMSGQTSG SSVNWVGEGK PKPVSALAFD TTTLRFTKAA GIVVLTDELV RFSNPSAEAL VQADLTASMA QFLDVAFVDP AIAEVAEVSP ASITHGVTPI VASGTTADAL KADVKRLFAA FLAANMTPAG AVWIMTPTMA LTISMMNNAL GQSEFPGIDM NGGTFMGLPV VVSESVPANP GSGSPVTGAG QRLILAKASE ILLADDGGVT IDVSREASLQ MNSTPTAGAT ELVSLWQNNM VALRAERFIN WKRRRLQAVG YIDSANYES
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