| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4068 |
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| Symbol | |
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| ID | 5194482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4587620 |
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| End bp | 4588609 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588545 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001269376 |
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| Protein GI | 148549274 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.902236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCC TGTTGTTCAG CAGCCAGCAC TACGATCAGG AAAGCTTCAC CAAGGCTGCC
AGCGGCACCA CCTTGGAGCT GCATTTCCAG CCCGCCCGCC TGACCCTCGA CACCGCCGCC
CTGGCAGAGG GCTTTGAGGT GGTCTGCGCC TTCATCAATG ACGAACTCGA CGCGCCGGTG
CTGCAGCGCC TGGCCGCAGC CGGCACGCGG TTGATCGCCC TGCGCTCGGC CGGCTACAAC
CACGTCGACC TGGCCGCCGC CCAGCGCTTG GGCCTGGCCG TGGTGCGCGT GCCGGCCTAC
TCGCCACACG CCGTTGCCGA GCACGCCGTG GCGCTCATCC TGGCACTCAA CCGGCGCCTG
CATCGGGCCT ACAACCGCAC CCGCGAAGGT GACTTCACCC TGCACGGGCT GACCGGCTTC
GACCTGCACG GAAAAACCGT CGGGGTGGTC GGTACCGGCC AGATCGGGGC CGCCTTCGCT
CGCATCATGG CCGGTTTCGG CTGCCAGCTG CTGGCGTACG ACCCCTACCC CAACCCAGAG
CTGCTGGCCC TTGGCGCCCG CTACATGCCC CTGCCCGAGC TGTTGCGCGA AGCCCGCATC
ATCAGCCTGC ACTGCCCGCT GACCGAGCAC ACTCGCCACC TGGTCAACGC GCAAAGCCTG
GCCCAGTTGC AGCCCGGCGC CATGCTGATC AACACCGGTC GCGGTGCGCT GGTCGACACC
CCGGCGCTGA TCGACGCACT GAAAAGCGGC CAGCTTGGCT ACCTGGGCCT GGACGTCTAC
GAGGAAGAAG CCCAACTGTT CTTCGAGGAC CGCTCCGACC TGCCCTTGCA AGACGATGTG
TTGGCTCGGC TGCTGACCTT CCCCAACGTG ATCATCACCG CCCACCAGGC TTTCCTCACC
CGCGAGGCGC TGGATGCCAT TGCCGCGACC ACACTGGACA ACATCAACCG CTGGGCGGCA
GGCAATCCAC AGAACCTGGT GATGGGTTAA
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| Protein sequence | MRALLFSSQH YDQESFTKAA SGTTLELHFQ PARLTLDTAA LAEGFEVVCA FINDELDAPV
LQRLAAAGTR LIALRSAGYN HVDLAAAQRL GLAVVRVPAY SPHAVAEHAV ALILALNRRL
HRAYNRTREG DFTLHGLTGF DLHGKTVGVV GTGQIGAAFA RIMAGFGCQL LAYDPYPNPE
LLALGARYMP LPELLREARI ISLHCPLTEH TRHLVNAQSL AQLQPGAMLI NTGRGALVDT
PALIDALKSG QLGYLGLDVY EEEAQLFFED RSDLPLQDDV LARLLTFPNV IITAHQAFLT
REALDAIAAT TLDNINRWAA GNPQNLVMG
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