Gene Pput_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4046 
Symbol 
ID5191597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4561651 
End bp4562946 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID640588523 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001269354 
Protein GI148549252 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGAT CGCGCCACTG CCCCGCCGTG TTGATCGCGG CACCCGCCTC AGGCCAGGGC 
AAGACTACCG TCACTGCTGC GTTGGCCCGC CTGCACCGCA ACCTCGGGCG CAAGGTGCGG
GTGTTCAAAT GCGGGCCCGA CTTTCTTGAC CCGATGATTC TCGAACGGGC CAGTGGCGCG
CCGGTGTATC AGCTGGACCT GTGGATGATC GGTGCCGAGG AAAGCCGTCG GCTGCTGTGG
GAAGCTGCTG GCGAGGCTGA CCTGATCCTC ATCGAAGGGG TGATGGGGCT GTTCGACGGC
ACCCCGTCAA GCGCTGACCT GGCGCGCCAC TTTGGCGTGC CGGTGCTGGC GGTGATCGAC
GGCACAGCCA TGGCCCAGAC CTTCGGTGCC CTGGCCCTGG GCCTGGCGCG GTACCAGGCC
GATCTGCCGT TCGCCGGCGT GCTGGCCAAT CGGGTAGGCA GCCTGCGTCA TGCGCAACTG
CTCGAAGGCA GCCTGACCGA GGGCTTGCGC TGGTATGGCG GCTTGTCCCG CGAACGCGGC
ATCGAACTGC CCAGCCGCCA CCTGGGCCTG GTGCAGGCCA GCGAGCTGAA TGACCTGGAC
ACCCGCCTGG ACGCTGCCGC CGAAGCGTTG GGCGCCAGTT GCGATGCGGC GTTGCCGCCG
CCAGTCAGCT TTGCCGAGCC TGAACCGCAA GCCTGCGTGG CCTCGCTGGC CGGTGTGCGC
ATTGGCGTGG CGCGGGACGA GGCGTTCGCC TTCACGTATG GCGCTAACCT CGACCTGTTG
CGCAACCAGG GTGCCCAGCT GGTGTTCTTC TCGCCGCTGC ACGACCACGA ACTGCCGGCG
GTAGACAGCC TGTATCTGCC GGGTGGTTAT CCTGAGCTGC ATCACCATGC GCTGGCCGCC
AACGCACCGA TGTGCGAGGC GATCCGTGCC CACCACGCGC AGGGCAAGCC ATTGCTGGCC
GAGTGCGGCG GCATGCTGTA CCTGCTCGAT GCCCTGACTG ACGTGGCCGG TGAACGTGCC
GAACTGCTCG GCCTGCTGCC GGGTGAGGCG ACCATGCAGA AGCGCCTGGC CGCCCTGGCG
CTGCAGGCGG TGGAGCTGCC GGAGGGGACC CTGCGCGGTC ACACCTATCA CCATTCGCTG
ACCAGCACTG CGCTGGAACC GATTGCCCGG GGCCTGAGCC CCAACGGCGG GCGTGGCAAC
GAGGCGGTTT ATCGTCTGGG CCGGCTGACG GCCTCTTACG TGCACTTCTA TTTCCCTTCC
TGCCCGGATG CGGCGGCGGC GCTGTTGCGA CCATGA
 
Protein sequence
MSRSRHCPAV LIAAPASGQG KTTVTAALAR LHRNLGRKVR VFKCGPDFLD PMILERASGA 
PVYQLDLWMI GAEESRRLLW EAAGEADLIL IEGVMGLFDG TPSSADLARH FGVPVLAVID
GTAMAQTFGA LALGLARYQA DLPFAGVLAN RVGSLRHAQL LEGSLTEGLR WYGGLSRERG
IELPSRHLGL VQASELNDLD TRLDAAAEAL GASCDAALPP PVSFAEPEPQ ACVASLAGVR
IGVARDEAFA FTYGANLDLL RNQGAQLVFF SPLHDHELPA VDSLYLPGGY PELHHHALAA
NAPMCEAIRA HHAQGKPLLA ECGGMLYLLD ALTDVAGERA ELLGLLPGEA TMQKRLAALA
LQAVELPEGT LRGHTYHHSL TSTALEPIAR GLSPNGGRGN EAVYRLGRLT ASYVHFYFPS
CPDAAAALLR P