| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4015 |
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| Symbol | |
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| ID | 5193538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4523424 |
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| End bp | 4525976 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588488 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001269323 |
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| Protein GI | 148549221 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA CAGCGAGCAG CGGGCAACGA GAGCGACTGG TCATCGTCGG CAACGGCATG
GTCGGCCACC ATTGCGTCGA ACAACTGGTC AGTCGCGGCG CCCTGCAGCG CTTCGAGGTG
CGGGTATTCG GCGAAGAGCG CCAACGCGCG TATGACCGCG TGCACCTGTC CGAATACTTC
GGCGGCAGCT GTGCCGAAAC CCTGGCCCTG TGTGAGCACG ATTTTTACGA CGCCAATGGC
GTGCACCTGC ACCTGGGTGA GGCCGTGCTG GAGATCGACC GTGAGCGCCG CGAAGTCGTC
ACTGCCGAAG GTCGCTATGG CTACGACCAA CTGGTGCTGG CCACCGGCTC CTATCCCTTC
GTACCGCCGA TCGAAGGCTC CAGCGGCAAT GCCCGCCTGG TCTACCGCAC CCTGGACGAC
CTCGATGGCA TTCGTGCTGC TGCAGCCGGT GCCCGCCGAG GGGTGGTGGT CGGCGGTGGC
CTGCTTGGCC TGGAAGCGGC CAACGCCCTC AAGTCGCTGG GGCTGGAAGC CCACGTGGTG
GAATTCGCCC CACGGCTGAT GCCGGTACAG CTGGACGGCG AGGGCGGTGC CGCGTTGAAG
GCGCAGATCG AAGCGCTGGG TGTGGGGGTG CACCTGTCGC GCGCCACCCA GTCGGTCAGT
GCCGGTGAAA CCTACCGCTA CCGCATGAAC TTCGACGGCG GTGAGCACCT GGAAACCGAC
CTGATCGTGT TCTCCGCCGG TATCCGCCCG CAGGATGCAC TGGGCCGGGG TTGCGGCCTG
GACATCGCCG CGCGCGGTGG CGTGGTCATC GATAACCACT GCCGCAGCAG CGACCCACGC
ATCTTCGCCA TCGGCGAGTG CGCCTCGTGG AACGGCAGTG TGTTCGGCCT GGTCGCCCCA
GGCTACAGCA TGGCGCGCAA CCTGGCTGGG CTGCTGATGG GCGAGGCGGC GGTGGCGTTC
ACCGGCGCCG ACATGTCGAC CAAGCTCAAG CTGCTGGGGG TGGATGTCGG TTCGATCGGC
GATGCCCACG GTGCCACGCC GGGCGCGCGC AGCTATCGCT TCATCGATGA AGCCAACAGC
GCTTACCGCC GTTTGGTGGT GGATGCCAGC GGCAAGCACG TGCTCGGCGC GGTGCTGGTC
GGCGACAACA GCTATTACGA CACCCTGTTG CAGTACGCCC AGAACGGCAT CGCCCTGCCG
GCCGACCCGG CAGCGCTGAT CCTGCCGCAA GGCGGTGGTG CGCCGGCTTT GGGCGCCGAT
GCGCTGCCCG ACAGCGCGAC CATCTGCTCC TGCCACAACG TCAGCAAGGG GGCGGTGTGC
GCCGCGATCG ACAGTGGCTG TAGCGACTTG GCTGCGGTCA AGGGCTGCAC CAAGGCCGCG
ACCGGCTGCG GCGGTTGCGC GGCCCTGCTC AAGCAAGTCT TCGAGCATGA ACTGACGGCC
CGCGGCGTGG CGGTGGACAA GAGCCTGTGC GAGCACTTTG CCTACACCCG GCAGGAGCTG
TACGGGTTGG TGCGGGTGGA GGGTATCCGC ACCTTCAGCG AACTGCTCGA GCGCCATGGC
AAGGGCCATC TGGGGTGTGA CATCTGCAAG CCGGCGGTGG GCAACATTCT CGCCTCGTGC
TGGAACCAGC CGATCATGGA CCCGGCGCTG GTACCGCTGC AGGACACCAA CGACACCTTC
ATGGCCAACA TGCAGAAAAA CGGCACCTAT TCGGTGGTGC CGCGCATTCC CGGTGGTGAA
ATAACCCCCG ACAAGCTTAT CGTCATCGGC CAGGTGGCCA AGAAATACGA CCTGTACACC
AAGATCACCG GTGGCCAGCG CATCGACCTG TTCGGCGCCC AGTTGCACGA GCTGCCGCTG
ATCTGGGGCG AACTGATCGA GGCCGGTTTC GAAACCGGCC ACGCCTACGG CAAGTCGACA
CGCACGGTGA AGTCGTGCGT GGGCAGTACC TGGTGCCGTT ACGGCGTGCA GGACAGTGTC
GCCATGGCCC TGCGCCTGGA AGACCGCTAC AAGGGCCTGC GCAGCCCGCA CAAGCTCAAG
TTCGCGGTAT CGGGTTGCAC CCGTGAATGC GCCGAGGCGC AGAGCAAGGA CATCGGCGTT
ATCGCCACCG ACAAGGGCTG GAACCTGTAC GTGTGCGGCA ACGGCGGCAT GCGCCCGCGG
CATGCCGAGC TGTTCGCCAC CGACCTGGAC GACGAAACCC TGGTACGCCT GATCGACCGC
GTACTGATGT TCTACATCCG CACGGCCGAC AAGCTGCAGC GCACCTCGGT GTGGCGTGAA
AACCTGGAAG GCGGGCTGGA CTACCTGAAG CAGGTGATCA TCGACGACAG CCTGGGCCTG
GCCAACGAGC TGGAAGCGCA GATGCAGCAT GTGGTCGACC AGTATGAATG CGAATGGGCC
AATGCCCTCA ACGACCCGGA GAAGCTCAAG CGCTTCCGCA CCTTTGTCAA CGACCGACGC
GCCGACCCGG ACGTGCACTT CGTGCGCGAA CGCGAACAAC GCCGGCCCGC TGCACCGCTG
CACCTGATCC CAACTGTCGA GGAGACTGTC TGA
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| Protein sequence | MKATASSGQR ERLVIVGNGM VGHHCVEQLV SRGALQRFEV RVFGEERQRA YDRVHLSEYF
GGSCAETLAL CEHDFYDANG VHLHLGEAVL EIDRERREVV TAEGRYGYDQ LVLATGSYPF
VPPIEGSSGN ARLVYRTLDD LDGIRAAAAG ARRGVVVGGG LLGLEAANAL KSLGLEAHVV
EFAPRLMPVQ LDGEGGAALK AQIEALGVGV HLSRATQSVS AGETYRYRMN FDGGEHLETD
LIVFSAGIRP QDALGRGCGL DIAARGGVVI DNHCRSSDPR IFAIGECASW NGSVFGLVAP
GYSMARNLAG LLMGEAAVAF TGADMSTKLK LLGVDVGSIG DAHGATPGAR SYRFIDEANS
AYRRLVVDAS GKHVLGAVLV GDNSYYDTLL QYAQNGIALP ADPAALILPQ GGGAPALGAD
ALPDSATICS CHNVSKGAVC AAIDSGCSDL AAVKGCTKAA TGCGGCAALL KQVFEHELTA
RGVAVDKSLC EHFAYTRQEL YGLVRVEGIR TFSELLERHG KGHLGCDICK PAVGNILASC
WNQPIMDPAL VPLQDTNDTF MANMQKNGTY SVVPRIPGGE ITPDKLIVIG QVAKKYDLYT
KITGGQRIDL FGAQLHELPL IWGELIEAGF ETGHAYGKST RTVKSCVGST WCRYGVQDSV
AMALRLEDRY KGLRSPHKLK FAVSGCTREC AEAQSKDIGV IATDKGWNLY VCGNGGMRPR
HAELFATDLD DETLVRLIDR VLMFYIRTAD KLQRTSVWRE NLEGGLDYLK QVIIDDSLGL
ANELEAQMQH VVDQYECEWA NALNDPEKLK RFRTFVNDRR ADPDVHFVRE REQRRPAAPL
HLIPTVEETV
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