Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4010 |
Symbol | |
ID | 5190714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4518911 |
End bp | 4520251 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588483 |
Product | major facilitator transporter |
Protein accession | YP_001269318 |
Protein GI | 148549216 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.835742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.379616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA CGCCTACCCC CCGCGCCGCG TCGTCGTACA CGCTGGACGC GGCCCCTGCC CAGCGCCTGC CTACCCGCCG CCGCTGGTTC ATGCTGTCGC TGCTGCTGGT GGCGACCATC ATCAACTACG TCGACCGGGT GAACATTTCC ATCGCCGCGC CGTTCATGGC CAAAGACCTG GGCCTGGACA AGGTCGAGAT GGGCCTGATT TTCTCCGCCT TCGCCTGGAC CTACGCGTTG GCCCTGGTAC CGGCTGGCTT CATTGCTGAC CGCTTCGGCT CGCGCCTGAC CTATGGTGTG TCGCTGATCA GCTGGTCGGC GGTCACCGTG GCCCAGGGCC TGGCCAGTGG CTTCGCCTCG CTGTTCGGCC TGCGCCTGGC GGTCGGCGCC ATGGAGGCCC CGGCCTTCCC GGCCAACAGC CGTGCGGTTA CGGTATGGTT CCCCGCCCGC GAGCGCGGCA TGGCCAGCAG CATCTACGTA TGTGGCCAGT ACCTGGGCAC CGCGCTGTTC ACCGGCGCGC TGCTGTGGCT GGCGACCACC TATGACTGGC GCCACGTGTT CTACAGCACC GGCCTGGTGG GCATCCTGTT CGGCGTCGTG TGGCTGGTGC TGTACCGCGA CCCGCTGAAC TGCAAGAAGG TCAGCAAGGA GGAACTGGCC TATATCGAGC ACGGTGGTGG CCTGGTGAAG AGCAGCCAGC AACGTACCCG CTTCGACTGG CGACAGGTTG CCGAGCTGTT CCGCTATCGC CAGGTCTGGG CGATCTGCCT GGGCAAGTTC GCCAGCACTT CGGCGCTGTA CTTCTTCCTC ACCTGGTTCC CCACCTACCT GATCGAAGAA CGCCAGCTGA CGCTGATCAA GGTCGGCATC TTCGCGGTCA TGCCGTTCAT TGGTGCCACG GTCGGCATCC TCCTGGCGGG CATCGTCTCC GACCTGCTGA TCCGCAAGGG TTACTCGCTG TCGTTTGCCC GCAAGCTGCC GCTGGTGGTG GGCTCGATGC TGGGGATGTC GATCGTGCTG GTGAACTTCA CCGACTCCAA TGTGCTGTGC ATCGCCGTGC TGACCCTGGC GTTCTTCGCC CAGGGCATCG CCTCGTCGTC GTGGGCTGCC GTCTCGGAAG TGGCGCCAAA GGAGCTGATC GGCCTGACCG GCGGCATTAC CAGCCTGGCG GCGAACATCG GCGGCATCGT CACACCGATC GTGATCGGCG CGATCGTGCA CGCCAGTGGC TCGTTCGCCA TGGCGTTCTG GTTCATCGGT GGTGTGGCGT TGATGGGCAC ACTGTCTTAC TCGTTGCTGC TTGGGAAGCT GTATCGCATC GAGCTGAAGG CTGCGGGCTG A
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Protein sequence | MSSTPTPRAA SSYTLDAAPA QRLPTRRRWF MLSLLLVATI INYVDRVNIS IAAPFMAKDL GLDKVEMGLI FSAFAWTYAL ALVPAGFIAD RFGSRLTYGV SLISWSAVTV AQGLASGFAS LFGLRLAVGA MEAPAFPANS RAVTVWFPAR ERGMASSIYV CGQYLGTALF TGALLWLATT YDWRHVFYST GLVGILFGVV WLVLYRDPLN CKKVSKEELA YIEHGGGLVK SSQQRTRFDW RQVAELFRYR QVWAICLGKF ASTSALYFFL TWFPTYLIEE RQLTLIKVGI FAVMPFIGAT VGILLAGIVS DLLIRKGYSL SFARKLPLVV GSMLGMSIVL VNFTDSNVLC IAVLTLAFFA QGIASSSWAA VSEVAPKELI GLTGGITSLA ANIGGIVTPI VIGAIVHASG SFAMAFWFIG GVALMGTLSY SLLLGKLYRI ELKAAG
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