Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4005 |
Symbol | |
ID | 5193774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4513626 |
End bp | 4514378 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640588478 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_001269313 |
Protein GI | 148549211 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000602021 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.494507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC ATCGTTTGGC GGCTGCGGTT GCCCTGGTAG GCCTGGTACT GGCTGGCTGC GATCAACAAG CCAGCAGCCC CGAGCTGAAG ACTCCGGCGC AGAAAGCCTC CTACGGTATC GGCCTGAACA TGGGCAAGAG CCTGGCTCAG GAAGGCATGG AAGACCTTGA TTCGAAAGCA GTCGCCCTCG GCATCGAAGA CGCCGTTAGC AAGAAAGAAC AACGCATCAA GGACGAAGAG CTGGTAGAGG CCTTCACCGC ATTGCAGAAA CGCGCCGAGG AGCGCCTGGC CAAGGCCAGC GAAGAAGCCG CCTCCGCCGG CAAGAAATTC CTCGAAGAAA ACGCCAAGAA ACCAGGCGTG GTTACCACTG CCTCGGGCCT GCAGTACGAA GTGGTCAAGA AGGCCGACGG CCCGCAGCCC AAACCGACTG ACGTGGTCAC TGTCCACTAC GAAGGCAAGC TGATCGATGG CAAGGTCTTC GACAGCTCCG TCGAGCGTGG CAGCCCGATC GACCTGCCGG TCAGCGGTGT GATCCCAGGT TGGGTCGAAG GTTTGCAACT GATGCACGTC GGCGAGAAGT ACAAGTTGTT CATCCCGGCG GAGCTGGCCT ATGGCGCACA AAGCCCAAGC CCGCTGATCC CGGCCAACTC GGTACTGGTG TTCGACCTGG AACTGATCGC CATCAAGGAT CCGGCCCAGT TGCAAGGTGC CGAGCCGCAG GCCGACGCCC CTGAAGAAGC ACCTGCCAAG TAA
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Protein sequence | MKQHRLAAAV ALVGLVLAGC DQQASSPELK TPAQKASYGI GLNMGKSLAQ EGMEDLDSKA VALGIEDAVS KKEQRIKDEE LVEAFTALQK RAEERLAKAS EEAASAGKKF LEENAKKPGV VTTASGLQYE VVKKADGPQP KPTDVVTVHY EGKLIDGKVF DSSVERGSPI DLPVSGVIPG WVEGLQLMHV GEKYKLFIPA ELAYGAQSPS PLIPANSVLV FDLELIAIKD PAQLQGAEPQ ADAPEEAPAK
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