| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3984 |
|---|
| Symbol | |
|---|
| ID | 5191589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4493312 |
|---|
| End bp | 4494247 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588457 |
|---|
| Product | lipid A biosynthesis lauroyl acyltransferase |
|---|
| Protein accession | YP_001269292 |
|---|
| Protein GI | 148549190 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.807023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.27961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCC CGCGTTTTCG TCCCTATTAC CTTCACCCCA AGTTCTGGGG CCTGTGGCTG
GGCCTGGGCC TGCTGTGGCT GGTGGTTCAG TTGCCGTACC GGGTGCTGCT GAGAATCGGT
GCCGCGCTGG GCGCCGTCAT GTATTGCTTT GCCGGTGAAC GTCGGCGCAT CGCCGCGCGC
AACCTGGAGC TGTGCTTCCC GGAGCTGTCG GTCGACGAAC GGCAGCGTTT GCTCAAGGCC
AACTTCGCCT CTACCGGCAT CGCCTTCTTC GAAATGGCCA TGAGCTGGTG GTGGCCCAAG
GCCAGGCTGG CGCGCCTGGC CCATATCGAG GGCCTTGAGC ACCTGCAGGC CGCCCAGCAG
GCGGGGCAGG GCGCGATCCT CATGGCGGTG CACTTCACTA CCCTGGAAAT CGGTGCCGCA
CTGCTCGGCC AGCAGCACAC GATCGACGGC ATGTACCGCG AACACGGCAA TGCACTGTTC
GACTTCATCC AGCGCAGCGG CCGCGAGCGT CACAACCTTG ATTCGCTGGC GGTGGAGCGC
GAGGACGTGC GTGGCATGCT CAAACTGCTG CGTTCGGGCC GGGCGATCTG GTACGCACCG
GACCAGGACT ACGGCGCCAA ACAGAGCCTC TTCGTACCGT TGTTTGGCAT CCCCGCAGCG
ACGGTCACCG CTACCACCAA GTTTGCCCGG CTGGGCAAGG CGCAGGTGAT TCCGTTCACC
CAGAAGCGCC TGGAGGATGG CAGCGGCTAT CGTCTGGTCA TCCACCCGCC GCTGGCGGAC
TTCCCCGGCG AGAGCGAGGA AGCCGACTGC CTGCGCATCA ACCAGTGGGT TGAACGTGTG
TTGCGCGAGT GCCCCGAGCA ATACCTGTGG GCGCACCGGC GGTTCAAGTC GCGGCCCGAA
GGGGCGCCGC GGCTGTATGA CAAGAAAAAG CGCTGA
|
|---|
| Protein sequence | MERPRFRPYY LHPKFWGLWL GLGLLWLVVQ LPYRVLLRIG AALGAVMYCF AGERRRIAAR
NLELCFPELS VDERQRLLKA NFASTGIAFF EMAMSWWWPK ARLARLAHIE GLEHLQAAQQ
AGQGAILMAV HFTTLEIGAA LLGQQHTIDG MYREHGNALF DFIQRSGRER HNLDSLAVER
EDVRGMLKLL RSGRAIWYAP DQDYGAKQSL FVPLFGIPAA TVTATTKFAR LGKAQVIPFT
QKRLEDGSGY RLVIHPPLAD FPGESEEADC LRINQWVERV LRECPEQYLW AHRRFKSRPE
GAPRLYDKKK R
|
|---|
| |