Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3934 |
Symbol | |
ID | 5193688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4432766 |
End bp | 4433671 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640588407 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001269242 |
Protein GI | 148549140 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.278537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTC TGTTGCTGGG TAAAGACGGA CAGGTTGGCT GGGAGTTGCA ACGTGCCCTG GTAGTCATGG GTGAGATCGT CGCCTTGGGC CGGAATCCGG TGTCTACCTC ATATGGCACG CTCAGCGGTG ATTTGTCGGA CCTGGACGGG TTGCGCCAGA CCATCCGTGC TGTTGCGCCT GATCTTATCG TAAATGCCGC AGCGTACACT GCTGTCGACA AGGCGGAGAC TGAGCAGGAA CTCGCCCGTA AGGTCAATGC CTTGGCTAGC GGGGTGATTG CTGAAGAGGC AAAGCGTCTG GATGCATTGT TCGTGCATTA CTCCACGGAC TATGTGTTCG ATGGTGCGGG TACAAGCCCC TGGAAAGAAA GTGATAGCGT ATCGCCGGTA AACTATTACG GCGCCACCAA GTTGGAAGGC GAGCAGCTGA TCGTCGCCTC AGGTTGCAAC TATCTGATTT TCCGGACCAG TTGGGTCTAC GCGGCAAAAG GGAACAATTT TGCCAAGACC ATGCTGCGCC TCGCTAAGGA ACGACAGACA CTGAATGTCA TTGCGGACCA GATTGGTGTG CCGACCAGTG CCGAGCTATT GGCCGATGTT GCAGTGCATG CAGTGCAGAA GACACTGAAC AATCCCAGCT TGTGCGGGAT TTACCACCTG GCTCCCGCGG GTGAGACGTC TTGGCACGCA TACGCGACAT ATGTCATTGC GTCTGCGCGA GCACACGGCG AGCCGTTAGC AGTGGAAACG ATCAATCCAA TTGCTACCAC GGAATATCCG ACGCCTGCAA ATCGTCCGTT GAACTCACGT CTGGATACAA CAAAGCTACG CGATGCTTTC GCTTTGCAAT TGCCGGACTG GAAAGTCGGT GTAACTCGAA TGCTCATGGA AATCTTGAAT AAATGA
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Protein sequence | MKVLLLGKDG QVGWELQRAL VVMGEIVALG RNPVSTSYGT LSGDLSDLDG LRQTIRAVAP DLIVNAAAYT AVDKAETEQE LARKVNALAS GVIAEEAKRL DALFVHYSTD YVFDGAGTSP WKESDSVSPV NYYGATKLEG EQLIVASGCN YLIFRTSWVY AAKGNNFAKT MLRLAKERQT LNVIADQIGV PTSAELLADV AVHAVQKTLN NPSLCGIYHL APAGETSWHA YATYVIASAR AHGEPLAVET INPIATTEYP TPANRPLNSR LDTTKLRDAF ALQLPDWKVG VTRMLMEILN K
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