| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3862 |
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| Symbol | |
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| ID | 5192262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4342982 |
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| End bp | 4344169 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588334 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001269170 |
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| Protein GI | 148549068 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.15313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0890532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCC CCACTCTCAG CCGCGCCTTG ATCCTGCTGA TGGCTACCGC CACAGGCCTG
GCCGTGGCCA GCAACTATTA CGCCCAACCG CTGCTGCACA GCATCGCCCA GCAGTTTGGC
TTGAGCACCG CCAGCGCCGG CAGCATCGTG ATTGCCGCGC AGCTCAGCTA TGGCGCCGGC
CTGTTACTGC TGGCACCGCT GGGCGACCTG TTCGAGCAGC GCCGGCTGAT TACCGTGATG
ACCGTTGTCT CCACCCTGGG CCTGGTCATC AGCGCCTGTG CACCCAGCCT GCCCTGGCTG
CTGCTCGGCA CGGCGCTGAC CGGGCTGTTC TCGGTGGTGG CACAGATCCT CGTGCCGATG
GCAGCGACCC TAAGCGAGCC GCATCAGCGT GGGCGCGCGG TCGGCACGCT GATGAGCGGC
CTGCTGCTGG GCATCCTGCT GGCGCGTACT GCTGCCGGCT TCATGGCCGA GCTGGGTGGC
TGGCGCAGTA TCTACGTGCT GGCCGCCGTG CTGATGGCAT TTACCGCCGT GGCGCTGTAC
CGCAGCCTGC CACAGCACCA CAGCCACGCC GGGCTGAAAT ACCCGGCCCT GATCGGCTCC
GTGTTCCGTC TGTTCATCGA AGAGCCCGTG CTGCGCCTGC GCTCGCTGCT CGGTCTGTTG
GCATTCAGCC TGTTCGCCCT GTTCTGGACC CCCCTGGCGT TTCTGCTGGC GAAAGGCCCC
TACCACTATT CGGATGCAGT GATCGGCCTT TTCGGCCTGG CCGGTGCGGC GGGTGCGTTG
TCGGCCAACT GGGCCGGGCG CCTGGCAGAC CGCGGCAAAG GCGCGCTGGG TACCACCGTG
GGCCTGGTGG TGTTGCTGCT GTCGTGGGTG CCGCTGGGGT TTGCCGAACA GTCCCTGCTC
GCCTTGCTGC TGGGGGTGCT GATGCTCGAC CTGGCGGTAC AGCTGGTGCA TGTGGGCAAC
CAGAACGCAG TGATCGCCCT GCGGCCCGAG GCACGTACGC GGCTGAATGC CGGTTATATC
ACCTGCTACT TCATCGGCGG GGCGCTTGGG TCGTTACTGG GCACGCAGCT GTTCCAGCGC
CAGGGCTGGA TGGGGATCGT GGTGGCCGGG CTGGTGATTG GCGGGCTGGC GTTGCTGGCC
TGGGGATGGG CCGAACGCAA GCGCAAGAAT GCCTTGCAGG TGGCCTGA
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| Protein sequence | MHTPTLSRAL ILLMATATGL AVASNYYAQP LLHSIAQQFG LSTASAGSIV IAAQLSYGAG
LLLLAPLGDL FEQRRLITVM TVVSTLGLVI SACAPSLPWL LLGTALTGLF SVVAQILVPM
AATLSEPHQR GRAVGTLMSG LLLGILLART AAGFMAELGG WRSIYVLAAV LMAFTAVALY
RSLPQHHSHA GLKYPALIGS VFRLFIEEPV LRLRSLLGLL AFSLFALFWT PLAFLLAKGP
YHYSDAVIGL FGLAGAAGAL SANWAGRLAD RGKGALGTTV GLVVLLLSWV PLGFAEQSLL
ALLLGVLMLD LAVQLVHVGN QNAVIALRPE ARTRLNAGYI TCYFIGGALG SLLGTQLFQR
QGWMGIVVAG LVIGGLALLA WGWAERKRKN ALQVA
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