Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3822 |
Symbol | fadE |
ID | 5191415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4284595 |
End bp | 4287042 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588289 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001269130 |
Protein GI | 148549028 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTGT TGTGGTTGGT GGTGCTGGTG ATCGGCGCGG CGTACCTCAC GCACCGGCGC CTGGCGCCCT TGCAGATTCT CGGCATCCTG GCGGCCTATG TGCTGTTGAT GGGCATTTTC AGCAGTGCCC CCGGCTGGCT GCTGGCCCTG ATCTGGGTGG TGCTGGCCCT GAAGATCGCC CTGGTTGCGC TGCCGCAGTG GCGACGCAAA GTCTTTACCG CCCCTGTATT CCGCTGGTTC CAGCGCACCC TGCCGCCCAT GTCCCAGACC GAGCGCGAAG CCATCGACGC CGGCACCGTG TGGTGGGACG GCGAACTGTT CAGTGGCCGC CCCGACTGGC GCACCTTGCT GGCCTACCCG GCACCGAAAC TGACCGAAGA AGAACAGGCC TTCATCGATG GCCCGACCGA AGCACTGTGC GCCATGGTCA GCGACTGGCA GATCGGCCAG GACCTGGACC TGCCGCCCGA AGCCTGGGCA CATATCAAGC AGCATGGCTT TTTCGCCCTG ATCATCCCCA AGGAATACGG CGGCAAGGGC TTCTCCGCCT ACGCCCACTC CCAGGTGGCG ATGAAACTGG CCACCCGCAG CGGCGACCTG GCCTCTACGG TGATGGTGCC CAACTCCCTC GGCCCTGCCG AACTGCTGCT GCACTACGGC ACCGACGAAC AACGCAACCA CTACCTACCG CGCCTGGCCC GTGGCGAGGA AATCCCCTGC TTCGCCCTCA CCGGCCCACT GGCCGGCTCC GACGCTGGCG CCATGCCTGA CACCGGCATC ATCTGCAAAG GCCAGTGGCA CGGTGAAGAA GTGATCGGCC TGCGCCTGAA CTGGGAAAAG CGCTACATCA CCCTCGGCCC AGTCGCCACC CTGCTGGGCC TGGCATTCAA GGCCTACGAC CCGGACCACC TGCTGGGCGA TGAGGAAGAA CTGGGCATCA GCCTGGCACT GATCCCCACC GATACCCCCG GGGTGGAAAT CGGTAAACGC CACCTGCCAC TGGGCGCCGC GTTCATGAAT GGCCCCAACA GCGGCAAGGA CGTGTTCGTC CCGCTGGACT TCCTCATTGG CGGCCAAGCG ATGCTTGGCA AAGGCTGGAT GATGCTGATG AACTGCCTGT CGGTAGGTCG CTCCATCTCA CTGCCTGCCG TGGGTACAGG GGCTGCCAAG TACACCAGCC TGGTGACCGG CCAGTACGCC AATATCCGCG AGCAATTCAA CGTGCCACTG GCTGCCTTCG AAGGTATCCA GGAGTCGCTG GCGCGTATTG GCGGCAACGC CTGGCTGATG GACAGTGCCC GCCTGCTGAC CGCGAAGGCC GTGGATCTTG GCGAGAAACC CTCGGTGCTG TCGGCGATCC TCAAGTACCA CCTCACCGAG CGTGGCCGCG AATGCATCCA GCACGCCATG GACGTGCACG GTGGCAAGGG CATCATCATG GGCCCGAACA ACTACCTGGG CCGCAACTGG CAAGGGGCGC CGATCTTCAT CACGGTCGAG GGCGCCAACA TCCTTTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCCAT TCGCTGCCAC CCGTTCGTGC TCAAGGAGAT GGCGTTGGCC GGGCGTGAAG ACCACGATCA GGCGCTCCAG GAATTCGATG ACCTGCTGAT GAAACACATC CTGTTCGCCG CCGGCAATGC GGCCAGCACC CTGGTGTTCA ACCTGGGGCT GGGGGTTTTC GAGAAAGTAC CGGGTGACAC GCTGAGCCAA GGCTACTTCC GGGCCCTCAA CCGCCAGGCC GCCGCCTTTG CCCTGCTGGC CGACCTGTCG ATGATGCTGC TGGGCGGGGC GCTCAAGCGC CGGGAGCGCC TGAGTGCGCG GCTGGGCGAT GTACTCAGCT ACCTGTACCT GTCCAGTGCC GCACTCAAGC GCTACCACGA TCTCGGTTCG CCCGAGCACA TGCAGCCCCT GCTGCGCTGG GCCGTGGAAG AAAGCCTGGG CCAGGCGGAG CACGCCCTGG ACCGGTTGCT CGACAACTTC CCCAACCGCT TCGTCGGCTG CGCGCTACGG GTGCTGGTGT TCCCCTTTGG CCGCCGTCAC ACCGGGCCGA GCGATGAACT GGACGCCGAG GTGGCAGCGC TGATAGGGCG CAGCAAAGGC GACCCTGCGC TGGAAGAGCT GCTTGCCGGT TGCTTCAGGC CGCAAGCCAA CGGCGACCCG GTGGCAGCCC TGCAACGAGC CTGCGACCTG CTGGAGGCGT CGACGCCGCT GCACAACGCG CTGCATCAGG CAATCAAGGA AGGCAAGGTA CGACCGGCGC CCGGGCAGTC GGTGATCGAT GCGGCAGTCG ACAGTGGTGT ACTTCAGCCT GATCAGGCGC AACGCCTGCA TGCAGCCGAG CAAGCGCGCC GTGCGGTGAT CGACGTGGAC GCCTTCGACA AGGCACAGCT GCTGCCGGAG CAAGGCAAGG TACGCTGA
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Protein sequence | MLLLWLVVLV IGAAYLTHRR LAPLQILGIL AAYVLLMGIF SSAPGWLLAL IWVVLALKIA LVALPQWRRK VFTAPVFRWF QRTLPPMSQT EREAIDAGTV WWDGELFSGR PDWRTLLAYP APKLTEEEQA FIDGPTEALC AMVSDWQIGQ DLDLPPEAWA HIKQHGFFAL IIPKEYGGKG FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGEEIPC FALTGPLAGS DAGAMPDTGI ICKGQWHGEE VIGLRLNWEK RYITLGPVAT LLGLAFKAYD PDHLLGDEEE LGISLALIPT DTPGVEIGKR HLPLGAAFMN GPNSGKDVFV PLDFLIGGQA MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA NIREQFNVPL AAFEGIQESL ARIGGNAWLM DSARLLTAKA VDLGEKPSVL SAILKYHLTE RGRECIQHAM DVHGGKGIIM GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDHDQALQ EFDDLLMKHI LFAAGNAAST LVFNLGLGVF EKVPGDTLSQ GYFRALNRQA AAFALLADLS MMLLGGALKR RERLSARLGD VLSYLYLSSA ALKRYHDLGS PEHMQPLLRW AVEESLGQAE HALDRLLDNF PNRFVGCALR VLVFPFGRRH TGPSDELDAE VAALIGRSKG DPALEELLAG CFRPQANGDP VAALQRACDL LEASTPLHNA LHQAIKEGKV RPAPGQSVID AAVDSGVLQP DQAQRLHAAE QARRAVIDVD AFDKAQLLPE QGKVR
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