Gene Pput_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3804 
Symbol 
ID5194641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4265650 
End bp4266177 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content56% 
IMG OID640588271 
Producthypothetical protein 
Protein accessionYP_001269112 
Protein GI148549010 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATG ACCCGATTCC ACCTCACGTT GACCCGCGCA AATTAGCCGA TCGTGGCGTA 
ACCCTTAACG GTTCGCTGCA ACTCGCTGAT TTGGAAAGAC TCTGCGACCC GCTTTCCGAC
AATGTCGGTA CGGTGCAGGC GAAGTTCGAT TTTGAACGAG ATGAACAGCA CGTGGTGGTC
ATCCACAGCG AGCTGGACGT CGAAGTCAAG ATGGTTTGCC AGCGTTGTCT TGAGCTGGTC
ACCCTACCGG TCCACAGCGA ATGTACATAC GCCGTGGTGA AGGAGGGTGC GAATACCCAG
TCGTTGCCGA AAGGCTATGA CGTGCTGGAA CTGGGCGAAG ATCCTTTGGA TCTGCAGGCA
TTGGTCGAGG AGGAGCTTTT GCTCGCCTTG CCAATCGTGC CTGCTCATCA TCCGGAAGAA
TGCCAGCAGC CGGCGGGCGC AGACGAGCCC GAATCGAGCA AGGACGAGGT ATCGCGGTCC
AACCCGTTCA GTGTTTTGGC GCAGTTAAAG CGTGACCCAA ACGTTTAG
 
Protein sequence
MLNDPIPPHV DPRKLADRGV TLNGSLQLAD LERLCDPLSD NVGTVQAKFD FERDEQHVVV 
IHSELDVEVK MVCQRCLELV TLPVHSECTY AVVKEGANTQ SLPKGYDVLE LGEDPLDLQA
LVEEELLLAL PIVPAHHPEE CQQPAGADEP ESSKDEVSRS NPFSVLAQLK RDPNV