Gene Pput_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3724 
Symbol 
ID5193871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4173286 
End bp4174326 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID640588180 
Producthypothetical protein 
Protein accessionYP_001269032 
Protein GI148548930 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAAC AGCTACGTAC GCCAGCCAGG CGTGGTGCCT GGCCTTGGGC AGCCAGCGCG 
ATGCTGGCAT TGGCATTGGG GGTGTGGGCC GACAGCGCCC AGGCCGCGGC CGCCGACGAA
TACTCCACCG AATCGGCCAA GGCCAGCCAA AGCCTGTTGA TCGACGCCAC CCATGCCGGC
AAGCGCCTGG TGGTGGTGGG TGATCGCGGC CACATTCTGT TCTCCGACGA CCAGGGCAGT
ACCTGGACCC AGGCCCGGGT ACCCACCCGG CAATTGCTCA CTGCCGTGTT TTTCCTCGAC
GACAAGCGTG GCTGGGCCGT CGGCCATGAC GCGCAGATCC TCGCCAGCAG CGACGGCGGC
GCCACCTGGA GCAAGCAGTT CGAAGACCTC GCCCGTGAAG CGCCCTTGCT CGATGTCTCC
TTCCTTGACG CTCAGCACGG CTTTGCCGTG GGGGCCTATG GTGCCTTGCT GGAAACCACC
GATGGTGGGC AGCACTGGCA GGATGTGGCC GAGCGGCTGG ACAACCCGGA CCAGCTGCAC
CTGAACGGTA TCGCCCACGT GCGCGATGCC GGCCTGTTCA TCGTGGGTGA GCAGGGCGGC
ATGTTTCGCT CCACCGACAA CGGCCAGACC TGGGCCAAGG TCCAGGGCCC CTACGAGGGC
TCGTTGTTCG GCGTGATCGG CACCGCCAGG CCGCAGACCC TGCTGGCCTA CGGCCTTCGC
GGCAACCTGT TCCGCTCCAG CGACTTCGGT GACAGCTGGC AGCCGATCGA ACTCAAGGCC
GCGCGCGGTA CCCTGGAGTT CGGCCTGGCA GGCGCTACGC TTGTCGATGA TGGCAGCCTG
GTGCTGGTCG GCAATGGTGG CAGCGTGCTG CGCAGCACGG ACGACGGCCA GACCTTCAGC
GTGTACAACC GTGCCGACCG CCTGGCCCTG GCCGGCGTCA GTGGCCTGGC CAACGGCGGC
CTGCTGCTGG TGGGGCAGGG GGGGGTGCAC CTGGCCAGCG CCGAAGGGGC TGATCAGGCG
GCCCGGGAGG TGCGCCCATG A
 
Protein sequence
MREQLRTPAR RGAWPWAASA MLALALGVWA DSAQAAAADE YSTESAKASQ SLLIDATHAG 
KRLVVVGDRG HILFSDDQGS TWTQARVPTR QLLTAVFFLD DKRGWAVGHD AQILASSDGG
ATWSKQFEDL AREAPLLDVS FLDAQHGFAV GAYGALLETT DGGQHWQDVA ERLDNPDQLH
LNGIAHVRDA GLFIVGEQGG MFRSTDNGQT WAKVQGPYEG SLFGVIGTAR PQTLLAYGLR
GNLFRSSDFG DSWQPIELKA ARGTLEFGLA GATLVDDGSL VLVGNGGSVL RSTDDGQTFS
VYNRADRLAL AGVSGLANGG LLLVGQGGVH LASAEGADQA AREVRP