| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3723 |
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| Symbol | |
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| ID | 5193870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4170890 |
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| End bp | 4173289 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588179 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001269031 |
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| Protein GI | 148548929 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA GGGAGAGCAT TGCCATGCAC CCGCATCACC AGGATAAAGC CACGCTGCTC
GAACGCCTGA TCTTCAACAA CCGCCCAGTG GTCATCGCCC TGTGCGTGCT GGTCAGCATT
TTCCTGTTCT GGCAGGCCAC GCAGATTCGC CCCTCCACCA GCTTCGAGAA GATGATCCCG
CTGCAGCATC CGTTCATCGA GCAGATGATG GAGCACCGCA ACGACCTGGC CAACCTCGGC
AACACCGTGC GCATCTCGGT GGAGGCGGTG AACGGTGACA TCTTCGACAA GGACTACATG
GAGACCCTGC GTCAGATCCA TGACGAAGTG TTCTACATCC CGGGTGTCGA TCGGGCCGGG
CTGAAGTCAC TGTGGAGCCC CAGCGTGCGC TGGAGCGAGG TCACCGAAGA GGGGTTTTCC
GGTGGTGAGG TCATCCCTAA CACCTACAAC GGGTCGCAGG ACAGCCTCGA TACCCTGCGC
GACAACGTGC TCAAGTCAGG CCAGGTGGGG CGCCTGGTAG GCAACAACTT CAAGTCCAGC
ATCGTCGACG TGCCGCTGCT GGAGAGCTAC CCCGACCCGC AGGACCCGGG CAAACAGGTG
AAGCTGGACT ACCAGCAGTT TTCTCACCTG CTGGAAGAGA AGATCCGTGA CAAGTTCCAG
GCGCAGAACC CCAATGTAAA AATCCACATC GTCGGCTTTG CCAAGAAGGT CGGTGACCTG
ATCGATGGCC TGGTGATGGT GGCGATGTTC TTCGGCGTTG CCCTGGTGAT CACCTGGGTG
CTGTTGTACT GGTTTACCTG GTGCATCCGC AGCACTGTCG CCGTGCTCAT TACCACGCTG
GTGGCGGTGG TCTGGCAGCT GGGGCTGATG CATGCGGTGG GCTTTGGCCT GGACCCGTAC
TCGATGCTGG TGCCGTTCCT GATCTTCGCC ATCGGCATTT CCCACGGGGT GCAGAAGATC
AACGGCATCG CCCTGCAGTC GAGTGACGCC GACAACGCCC TTACCGCTGC CCGGCGCACA
TTCCGTCAGT TGTTCCTGCC GGGAATGATC GCCATCCTTG CCGACGCGGT GGGCTTCATT
ACCCTGCTGA TCATCGACAT CGGGGTGATT CGCGAATTGG CCATCGGCGC CTCCATCGGC
GTGGCGGTGA TCGTGTTCAC CAACCTGATC CTGCTGCCGG TGGCCATCTC CTACGTGGGC
ATCAGCAAGA AGGCCATCGA ACGCAGCAAG AAAGACGCGA CCCGCGAGCA CCCGTTCTGG
CGCCTGTTGT CGAACTTCGC CAGTGCCAAG GTAGCGCCGG TGTCGGTGGT GCTGGCGCTG
CTCGCCTTCG CCGGGGGCTT GTGGTACAGC CAGAACCTGA AGATCGGCGA CCTCGACCAG
GGTGCACCGG AGCTGCGCCC CGACTCACGC TACAACCAGG ACAACAACTT CATCATCAGC
AACTACTCGA CCAGTTCCGA TGTGCTGGTG ATCATGGTCA AGACGCCGTC GGAGAAGTGC
TCGGTCCACT CGACCATGGC GCCGATCGAC GAGCTGATGT GGACCATGGA AAACACCCCT
GGCGTGCAGT CGGCGATTTC CCTGGTCACC GTTTCCAAGC AGGTGATCAA GGGCATGAAC
GAGGGCAGCC TGAAATGGGA AACCCTGTCG CGTAACCCGG ACATCCTCAA CAACTCCATC
GCCCGGGCTG ACGGCCTTTA TAACGGCGAC TGCTCATTGG CACCCGTGCT GGTGTTCCTC
AATGACCACA AGGCTGAAAC GCTGGAGCGT GTCACCGCCG TGGCCAAGGC GTTTGCCGAC
AGCCATGACA AGGAAGGCCT GCAGTTCCTG CTGGCGGCGG GCAACGCCGG TATCGAGGCA
GCGACCAACG AAGTGATCAA GTCGGCCGAA CTGACCATCC TGATCCTGGT GTACATCTGC
GTGGCAGTGA TGTGCCTGAT CACCTTCCGC TCGTTCGCCG CCACGCTGTG CATCGTGCTG
CCCCTGGTGC TGACCTCGGT GCTGGGCAAC GCGCTGATGG CCTATATGGG CATCGGGGTG
AAGGTGGCGA CCTTGCCGGT GGTGGCGCTG GGGGTGGGGA TTGGCGTGGA TTACGGCATC
TACATCTACA GCCGGCTGGA GAGCTTCCTG CGTGCGGGGC TGCCGTTGCA GGAGGCCTAT
TACCAGACCC TGCGCTCGAC GGGTAAAGCC GTGTTGTTCA CTGGCTTGTG CCTGGCCATC
GGCGTGTGCA CCTGGATCTT CTCGGCAATC AAGTTCCAGG CTGATATGGG GCTGATGCTG
ACCTTCATGC TGCTGTGGAA CATGTTTGGC GCGCTGTGGC TGCTGCCGGC GCTGGCACGG
TTCCTGATCA AGCCGGAGAA GATGGTGGGC AAGGAGGGGG GCTCGATTTT CGCCCATTGA
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| Protein sequence | MTSRESIAMH PHHQDKATLL ERLIFNNRPV VIALCVLVSI FLFWQATQIR PSTSFEKMIP
LQHPFIEQMM EHRNDLANLG NTVRISVEAV NGDIFDKDYM ETLRQIHDEV FYIPGVDRAG
LKSLWSPSVR WSEVTEEGFS GGEVIPNTYN GSQDSLDTLR DNVLKSGQVG RLVGNNFKSS
IVDVPLLESY PDPQDPGKQV KLDYQQFSHL LEEKIRDKFQ AQNPNVKIHI VGFAKKVGDL
IDGLVMVAMF FGVALVITWV LLYWFTWCIR STVAVLITTL VAVVWQLGLM HAVGFGLDPY
SMLVPFLIFA IGISHGVQKI NGIALQSSDA DNALTAARRT FRQLFLPGMI AILADAVGFI
TLLIIDIGVI RELAIGASIG VAVIVFTNLI LLPVAISYVG ISKKAIERSK KDATREHPFW
RLLSNFASAK VAPVSVVLAL LAFAGGLWYS QNLKIGDLDQ GAPELRPDSR YNQDNNFIIS
NYSTSSDVLV IMVKTPSEKC SVHSTMAPID ELMWTMENTP GVQSAISLVT VSKQVIKGMN
EGSLKWETLS RNPDILNNSI ARADGLYNGD CSLAPVLVFL NDHKAETLER VTAVAKAFAD
SHDKEGLQFL LAAGNAGIEA ATNEVIKSAE LTILILVYIC VAVMCLITFR SFAATLCIVL
PLVLTSVLGN ALMAYMGIGV KVATLPVVAL GVGIGVDYGI YIYSRLESFL RAGLPLQEAY
YQTLRSTGKA VLFTGLCLAI GVCTWIFSAI KFQADMGLML TFMLLWNMFG ALWLLPALAR
FLIKPEKMVG KEGGSIFAH
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