| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3704 |
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| Symbol | |
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| ID | 5190859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4147986 |
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| End bp | 4149533 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588160 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001269012 |
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| Protein GI | 148548910 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0990866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTTG GAACCCTATC CAGTCGAAGT GCCAGATACT GGCCTGAACG TCTGGCGGTA
ATCGACCGCC ACACCCGGCT GACCTTCGCT CAGCTCGAAC AGCGGGCCAA CCAGCTGGCC
TCGGCCTTGC TGGCACAGGG CATCGCCACG GGCGAGCATG TCGCCATCCT GGCGCCAAAC
CGCGCCGAAC TGGTGGAAGC AGAGGTGGCT TTCTACAAGG CCGGCCTGGT CAAGGTACCG
GTCAATGCGC GTCTGGCACC GGATGAAGTC ATTCAGGTGC TCAACGACGC CTGCAGTGTC
GCGCTGATCG CCGATGCGCA ACTCGCCCAG GCGTTGCTGG ACCGCAGGCA GGAGGTACCT
TCATTACGCT TGATCGTGAC CTTGGGTGAG CGGGGCGGTG ACATCACCTA TGCCGCGCTG
CTGGCACAAG GCAGTAGCCA GCCAATCAGC TGCGACCTGC CTGACGACGC CCTTGCCGTT
TTGCATTACA CCTCTGGCAG CTCTGGTGTG CTCAAGGCTG CGATGCTCAG CGTGGGCAAC
CGCAAGGCGC TAATCCGCAA GAGCCTCGCC AGCCCGACCC GTCGCGCCGC CCCGGGCGAC
GTCATGGCTC ACGTCGGCCC TATCACCCAT GCCAGCGGCA TGCAGCTGAT GCCGCTGCTG
GCGGTCGGTG CCTGCAACCT GCTGCTGGAG CGCTACGATG ACCAGCTGTT GCTCGAGACC
ATTCAGCGCG AAGGCGTGAC CCGCTTGTTC CTGGTGCCTG CCATGATCAA TCGCCTGGTC
AACTTCCCTG ATGTCGAGCG CTACGACCTG AGCAGCTTGC GCCTGGTCAT GTACGGTGCC
GCGCCGATGG CACCAGCGCT GGTGAAACGG GCCATCGAGG TATTCGGGCC GATCCTGGCC
CAGGGTTACG GTGCTGGCGA GACCTGCTCG CTGGTAACCG TCCTGACCGA ACAGGACCAT
TTGTGCGAGG GCGGCGACTA CCGGCGCCTG GCCTCGTGCG GACGTTGCTA CTTCGAAACC
GACCTGCGCG TGGTGAACGA CCACTTCCAG GACGTCCAGC CGGGAGAGGT GGGCGAAATC
GTAGTCAAGG GCCCGGACAT CATGCAGGGC TACTGGCGCG CCCCCCACCT CACCGCCGAG
GTGATGCGCG ACGGCTACTA CCTGACTGGC GACCTGGCCA CGGTGGATGA GCAGGGGTAT
GTGTTCATCG TCGACCGCAA GAAAGAAATG ATCATTTCCG GTGGCTTCAA CATTTACCCC
AGCGAGGTCG AGCAGGTGCT CTACAGCATG CCGCAGGTGT TCGAGGCGGC GGTGGTGGGG
GTGCCTGACG AGCAGTGGGG CGAAGCGGTG CGGGCGGTGA TCGTGCTCAA GCCGGGCATG
GCGCTGCAGG AGCAGGACGT CATCGAACAT TGCGCCCAGG CCCTGGCCGG TTTCAAGAAA
CCACGTGCCG TGGACTTCGT CAGCGAGCTG CCGAAAAACC CCAACGGCAA GGTGGTGCGC
CGGTTGATCC GTGACGCCTA CTGGCAAAAC AGCGAACGCC GTATCTGA
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| Protein sequence | MNLGTLSSRS ARYWPERLAV IDRHTRLTFA QLEQRANQLA SALLAQGIAT GEHVAILAPN
RAELVEAEVA FYKAGLVKVP VNARLAPDEV IQVLNDACSV ALIADAQLAQ ALLDRRQEVP
SLRLIVTLGE RGGDITYAAL LAQGSSQPIS CDLPDDALAV LHYTSGSSGV LKAAMLSVGN
RKALIRKSLA SPTRRAAPGD VMAHVGPITH ASGMQLMPLL AVGACNLLLE RYDDQLLLET
IQREGVTRLF LVPAMINRLV NFPDVERYDL SSLRLVMYGA APMAPALVKR AIEVFGPILA
QGYGAGETCS LVTVLTEQDH LCEGGDYRRL ASCGRCYFET DLRVVNDHFQ DVQPGEVGEI
VVKGPDIMQG YWRAPHLTAE VMRDGYYLTG DLATVDEQGY VFIVDRKKEM IISGGFNIYP
SEVEQVLYSM PQVFEAAVVG VPDEQWGEAV RAVIVLKPGM ALQEQDVIEH CAQALAGFKK
PRAVDFVSEL PKNPNGKVVR RLIRDAYWQN SERRI
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