| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3679 |
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| Symbol | |
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| ID | 5195210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4119311 |
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| End bp | 4120408 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640588135 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001268987 |
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| Protein GI | 148548885 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC GGACGTTACT GGCCTGGGCT GGCGCTGTTG CCGGTGCGCT GGCCGCTGCC
TATGCGCTGG TGGGAAGCGG CTCGGCGCCA CCCGCTGCGG CGGTGTGGCC GGCGACCAAG
GTGGCGCTGG CCACGGCCGA GCAGGTGCAA CTGGCGCGGC AGCGCTTTGC TTCGGGGGAG
TTGGAGGCGG TCAACCAGGT GCAGGTGGCG GCCGAGATGC CAGGGCGTAT TACCCGCATC
GCCTTCGAGT CGGGGCAGAC AGTCGCGGCC GGGCAGTTGC TGGTGCAGCT CAACGACGCG
CCCGAGCAGG CCCTTCGCGT GCAGTTGCAG GCCAGGTTGC GTAACGCTGA CGTGGTGCTG
CAGCGCAGCC GCAAACTGCG CGCGATGAAT GCCGTGTCGC AAGAGCTGCT GGACAACGCC
GCCACTGCCG TGGACGTGGC CCGTGGTGAG CTGCAGCATG TCGAGGCGCT GATCGCGCAG
AAGGCCATTC GTGCTCCGTT CGCCGGCAAG CTCGGCATCC GCCGTGTGCA TCAGGGCCAG
TACCTGGGCG CTGGCGAGAC CATCGTCAGC CTGGCCGACA TCAGCCAGTT GCATGTGAAC
TTCGCCTTGG GCGAGCAGGC CGCCCCCGAA GTGCACGCCG GGCAAGTGTT GGCACTGACG
GTAGACGCGG TGCGTGGGCA AGACTTCCAG GCGCGGGTGG TGGCGGTCGA TCCGGTGGTC
AGCACAGCAC GCCTTGTGCA GGTACAGGCG GCCTTGCCGA ACCCGCAAGG GCAGTTGCAG
CCGGGTATGT ATGCCGGCGT GCGGCTGGAT GCTGCGCAGC CGTCGACCGT GCTGGCCGTG
CCGGAAACCG CGATCACCTA CACCGCCTAT GGGCAGACGG TGTTTGTCGC GACCCAGGAC
CCGCAGCATG GCACCCGGGT GAGCCGGGTG CAGGTAACCA CCGGTGAGCG CTGGCAGGGG
CGGGTGGAAA TCACCTCCGG CCTGACGCCC GGTGACCGTG TGGTGGTTTC CGGCCAGCTG
AAACTGAGTG ATGGCATGCC GGTCGAGCCA GTGGCGCAGG ACAGCCTGCA GGCCAGCCAG
GGAGGGCGGC AGTCGTGA
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| Protein sequence | MNKRTLLAWA GAVAGALAAA YALVGSGSAP PAAAVWPATK VALATAEQVQ LARQRFASGE
LEAVNQVQVA AEMPGRITRI AFESGQTVAA GQLLVQLNDA PEQALRVQLQ ARLRNADVVL
QRSRKLRAMN AVSQELLDNA ATAVDVARGE LQHVEALIAQ KAIRAPFAGK LGIRRVHQGQ
YLGAGETIVS LADISQLHVN FALGEQAAPE VHAGQVLALT VDAVRGQDFQ ARVVAVDPVV
STARLVQVQA ALPNPQGQLQ PGMYAGVRLD AAQPSTVLAV PETAITYTAY GQTVFVATQD
PQHGTRVSRV QVTTGERWQG RVEITSGLTP GDRVVVSGQL KLSDGMPVEP VAQDSLQASQ
GGRQS
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