| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3676 |
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| Symbol | |
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| ID | 5192099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4113832 |
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| End bp | 4115346 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588132 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001268984 |
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| Protein GI | 148548882 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTG AGCAAACGGT CTCGCTGCGT GCCTGGGTAG CGGTGCTTGG CGGCCTGTTC
GGCTGCTTCA TGGCGGGTAT GAACGTGCAT GTCACCAGCG CCGCACTGCC GGAAATCCGC
GGCTCGCTGG GTGCCAGCTT CGAGGAAGGC TCATGGATCT CCACCGCCTA CCTGGTGGCG
GAAATCGTGA TGATTCCGCT GACGGCCTGG TTGGTGGACG TGTTCTCGCT GCGCCGGGTC
ATGTGGACCG GCTCGCTCAT CTTTCTGATC GCCTCGGTGG CATGCTCATG GGCGCCCAAC
CTGGAGGCGA TGATTGTAAT CCGGGTGATC CAGGGGGCTG CGGGCGCGGT GCTGATTCCC
CTGTCGTTCC AGCTGATCAT CACCGAACTG CCGGCCAGCA AGATGGCCAT GGGCATGGCG
CTATTCAGCC TGGCCAACAG CGTGGCGCAG GCCGCCGGGC CGTCGATTGG CGGCTGGCTG
ACCGATGCCT ATTCGTGGCG CTGGATCTTC TATCTGCAAC TTTTCCCCGG CATTGCGCTG
CTGCTGGCCA TCGCCTGGTC GATCGAAGCC AAGCCGATGA AGCTCGAACT GTTACGCAAA
GGTGATTGGC TGGGTATCGC GGCCATGGTG ATCGGCCTGG GCGGCTTGCA GATCGTGCTG
GAAGAAGGCG GTCGGCTGGA CTGGTTCGGC TCGCCGCTCA TTGTCGGCAT GAGCGTGGTC
GCTGCCATTG CGTTGGTGGT GTTCGTGGTG ACCCAGCTGT TCGGCCAGCG CGCGTTCATC
AACCTGCGCT TGCTCGGGCA CTACAACTTC GGCGTTGCCA GCGTGGCGAT GTTCATCTTT
GGCGCTGCCA CGTTCGGCCT GGTGTTCCTG GTGCCCAACT ACCTGTCGCA GTTGCAGGGG
TTCAGCGCGC ACGACGTGGG CGTGGCGCTG ATCGCCTATG GCGTGGTGCA GTTGTTGCTG
GCGCCGTTGA TGCCCCGGCT GATGGGCTGG ACCAGTGCCA AGTTCATGGT CGCCAGCGGC
TTTTTGATCA TGGCGCTGGG CTGCTGGCTG GGGGCTGGCC TGAGCGCCGA CAGTGCCGAC
AACGTGATCA TCCCGTCCAC GGTGGTGCGC GGTATTGGCC AGCCTTTCAT CATGGTTGCG
TTATCGGTGC TGGCGGTGGC CGGGCTGGAC AAGCGTGAAG CCGGCTCAGC CTCGGCGGTG
TTCTCGATGT TGCGCAACCT GGGTGGCGCC ATCGGTACGG CCGGGTTGAC GCAACTGGTG
GCGACCCGTG AACGCTTTCA CAGTGAGCGC ATTCACGAGC AGGTGACGCT GTTCGAGCCA
AGCGTCCAGG CGCGTATCAA CCAGACGGTG CAAAGCTGGC TGCCGCCTCA GCAGCAAATG
CTGGAAGCGT TGGCGGCGAC CATTCGACGA GAGGCTTACC TGATGGCCTA CAGTGATGCG
TTCTACCTGG CGTGCCTGGC ATTGGTCGGG TGTGCCCTTG CAGCGTTGCT GCTGCGGGCC
AGAGAGCAGC ATTGA
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| Protein sequence | MRTEQTVSLR AWVAVLGGLF GCFMAGMNVH VTSAALPEIR GSLGASFEEG SWISTAYLVA
EIVMIPLTAW LVDVFSLRRV MWTGSLIFLI ASVACSWAPN LEAMIVIRVI QGAAGAVLIP
LSFQLIITEL PASKMAMGMA LFSLANSVAQ AAGPSIGGWL TDAYSWRWIF YLQLFPGIAL
LLAIAWSIEA KPMKLELLRK GDWLGIAAMV IGLGGLQIVL EEGGRLDWFG SPLIVGMSVV
AAIALVVFVV TQLFGQRAFI NLRLLGHYNF GVASVAMFIF GAATFGLVFL VPNYLSQLQG
FSAHDVGVAL IAYGVVQLLL APLMPRLMGW TSAKFMVASG FLIMALGCWL GAGLSADSAD
NVIIPSTVVR GIGQPFIMVA LSVLAVAGLD KREAGSASAV FSMLRNLGGA IGTAGLTQLV
ATRERFHSER IHEQVTLFEP SVQARINQTV QSWLPPQQQM LEALAATIRR EAYLMAYSDA
FYLACLALVG CALAALLLRA REQH
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