Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3675 |
Symbol | |
ID | 5192098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4112697 |
End bp | 4113842 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588131 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001268983 |
Protein GI | 148548881 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTTG CCGTAGACAA ACCCTCACCC GCCGAAACTG AACAGCGGCC GAGCGCTAGA AGCCGTCGCC GCCTGGCAGT CATCGCCAGC GGCAGCCTGG CCGCAATCAC CCTGCTGGCC TTCACCTGCT ACTGGTTAAG CACCGGCCGC TACCTGGAAA CCACCGACGA TGCCTACGTC CGCGCCGACT GGGTGGCCCT GAGCCCACGC GTGGCGGGCT ACGTAGCCAA GGTCGAGGTG GCTGACGACC AGCCGGTAAA AGCCGGTGAT GTGCTGGTGC GCCTGCAAAA CCGCGACTAC CGCGCCCGCC TCGACCAGGC CCGGGCTGGC GTGACCGAGG CACAGGCGGC ACTGGCCGCC GCCCAGGCCA GCCAACAGAT AGCGACCGAG CGCATCGACC AGCAACAGCA AGCCATCCTG CAGGCCGAGG CTGTCGTGCG CAGCGCCACC GCCGAACAGC ACCGCAGTGA ACTGGATGTC CAACGCTACC GTGGCCTGGT GCGTGACGAT GCAGCGACCA TGCAGCGCCT GGAAACCGCC AGCGCCCATG CCAGCCAGGC ACAAGCCGCG CGGCAAGGTG CCCAGGCCGC GCTGCGCCAG CAACGCGCTC AACTGGCCAT GGCCAAGGCC CGGTCAGCCC AGGCCGAGGC CGAGCTGCAA CAACGGGCAG CGGCCCTGGC ACGCGCCCTG GCCCACCAAC AGCTTTCCGA GCAAGACGAA CAGGACACGG TGATCCGCGC GCCGATCACC GGCGTGGTCG GCCAACGCCG CGTACGCACC GGCCAGTACG TGGTGCCGGG CCAGCCGCTG CTGGCTGTGG TGCCCCTACA GCAGGCCTAT GTAGTGGCCA ACTACAAGGA AACCCAACTG GCCCGCATGC GCCCTGGGCA ACCGGTAGAA ATACATGTCG ACAGCTTCGC CAGCCAGCCA CTGCATGGCC ATGTGGCCAG TTTCTCGCCA GCCTCGGGCA ATGTCTTCGC CTTGCTGCCG TCGGACAATG CCACCGGCAA TTTCACCAAG ATCGTCCAGC GTTTCCCGGT GCGCATTTTG CTCGACAAAC CGTTGGATGG CCCGCAGGTA CTGCCCGGCA TGTCGGTGGT CAGTACAGTC GACACACGCC CCGCAGAGGT TGCCGATGCG CACTGA
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Protein sequence | MNVAVDKPSP AETEQRPSAR SRRRLAVIAS GSLAAITLLA FTCYWLSTGR YLETTDDAYV RADWVALSPR VAGYVAKVEV ADDQPVKAGD VLVRLQNRDY RARLDQARAG VTEAQAALAA AQASQQIATE RIDQQQQAIL QAEAVVRSAT AEQHRSELDV QRYRGLVRDD AATMQRLETA SAHASQAQAA RQGAQAALRQ QRAQLAMAKA RSAQAEAELQ QRAAALARAL AHQQLSEQDE QDTVIRAPIT GVVGQRRVRT GQYVVPGQPL LAVVPLQQAY VVANYKETQL ARMRPGQPVE IHVDSFASQP LHGHVASFSP ASGNVFALLP SDNATGNFTK IVQRFPVRIL LDKPLDGPQV LPGMSVVSTV DTRPAEVADA H
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