| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3588 |
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| Symbol | |
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| ID | 5192356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4002679 |
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| End bp | 4003929 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588043 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001268896 |
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| Protein GI | 148548794 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.488659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAC CTCTTTTCGC ATTCATCGGT ACGCGTTATA CCCGTGCCAA ACGTCGCAAT
CACTTCGTCT CGTTCATTTC CCTGACCTCG ATGATCGGCC TCGCCCTGGG CGTGGTGGTA
ATGATCGTGG TGCTGTCGGT GATGAACGGT TTCGACCACG AGATGCGCAC CCGCGTGTTG
GGGATGATTC CCCATGCCAC GCTGGAGAGC GGCCAGCCCA TTGCCGACTG GCAGGCCCTT
GCCCAACAAG TAAAGCAGAA TCCGCAGGTG GTGGCGGTTG CACCGTTCAC CCAGATGCAG
GGCCTGCTGA CCCATGATGG CAAGGTGCAG AAGGTGCTGC TCAACGGCAT CGACCCTGCT
CGCGAGCGCG AGGTGTCGAT CATCGACAAC TTCGTCCTGC AAGGCCGCCT GGACCAGTTG
GCGCCGGGCG AGTGGGGCAT CATGATCGGC GACAAGGCGG CGGCCAAGCT GGGCGTTGCC
ATCGGCGACA AGCTCACCTT CGTCGCCCCC GAGGTCAGCG TGACCCCCGC CGGCATGTTC
CCGCGCATGA AGCGCTTCAC CGTAGTCGGC ACCTTCCACG TTGGCGCGGG GGAGATCGAC
GGCTACCTGG GCCTGACCAA CATCAGCGAC CTGTCCCGCC TGCACCGCTG GAAGCCCGAC
CAGGTCCAGG GCCTGCGCCT GAAGTTCGAC GACCTGTTCC AGGCGCCGCG TGTAGCCTGG
AGCATCGCCC AGCAGCTGGG CGAACAGGAG TTCTATAGCC GTGACTGGAC CCGTACCCAC
GGCAACCTGT ACCAGGCGAT CCGTATGGAA AAGGCCATGA TCGGCCTGCT GTTGCTGCTG
ATCGTGGCGG TGGCGGCGTT CAACATCATT TCCACCCTGG TGATGGTGGT CAACGACAAG
CGCGGCGACA TCGCCATCCT GCGCACCCTG GGCGCCACGC CCGGGCAGAT CATGCTCATC
TTCATGGTCC AGGGTACGGT GATCGGGGTG ATCGGTACCC TGATCGGCGC CGTCGTCGGG
ATCTTCGCGG CCCTGAACGT GAGCGCGGCG ATCGCCGGCA TCGAGACACT GATCGGCCAC
AAGTTCCTCA ACGCCGACGT GTACTTCATC GATTACCTGC CGTCGCAGAT CCTGGCCCAG
GACGTGTACA TGGTCTGCGG TGCGGCACTG GTCCTGAGTT TCTTCGCCAC CCTGTATCCG
GCCTGGCGTG CGGCCCGCAC CCAGCCTGCA GAGGCGCTAC GTTATGAGTG A
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| Protein sequence | MFRPLFAFIG TRYTRAKRRN HFVSFISLTS MIGLALGVVV MIVVLSVMNG FDHEMRTRVL
GMIPHATLES GQPIADWQAL AQQVKQNPQV VAVAPFTQMQ GLLTHDGKVQ KVLLNGIDPA
REREVSIIDN FVLQGRLDQL APGEWGIMIG DKAAAKLGVA IGDKLTFVAP EVSVTPAGMF
PRMKRFTVVG TFHVGAGEID GYLGLTNISD LSRLHRWKPD QVQGLRLKFD DLFQAPRVAW
SIAQQLGEQE FYSRDWTRTH GNLYQAIRME KAMIGLLLLL IVAVAAFNII STLVMVVNDK
RGDIAILRTL GATPGQIMLI FMVQGTVIGV IGTLIGAVVG IFAALNVSAA IAGIETLIGH
KFLNADVYFI DYLPSQILAQ DVYMVCGAAL VLSFFATLYP AWRAARTQPA EALRYE
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