| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3564 |
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| Symbol | |
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| ID | 5192653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3981738 |
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| End bp | 3982577 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588020 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001268873 |
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| Protein GI | 148548771 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG3449] DNA gyrase inhibitor
[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.236142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGT TCGAAACCGT GCTTGCCTAC ATCGACAGCC ACCTCGAAGG CGATCTGTCG
GTGAATGCCT TGAGCCGCAT CGCCAACTTC TCGGCATTTC ACTTCCATCG GCAGTTCACG
GCCTACATGG GCGTTCCGGT TTCACGGTAT GTGCAACTGA TGAGGCTTCG ACGCGCAGCG
CATCAACTGG TCGCCTCGCC CGCGACGCCC ATACTGGAGG CCGCATTCGG CGCCGGCTTC
GAAAGCCCCG AAGCCTTTGC CAGAGCGTTC AAGCGCGCCT TCGGCATGGC GCCGAGCGCT
TTCGCCAAGG CGCCGAACTG GCAGGCCTGG AGTGCGGTAT TCAATGTTCC TCAGCGATCC
AGGAGTATCA CCATGCAGAT CCGTATCGTG AATTTCGCCG AAACCCGCGT GGCCGCGCTC
GAACACCAAG GGCCGCCCGG CCTGGTCAGC GAAAGCGTCG CGCGTTTTCG CCAATGGCGC
ATGCACAGCG GCCAGTCGCC TGTGGCCAGC AGCCGTACCT TCGGTATCCC CTACGACAAC
CCCGACACCA CCCCGGCCCA CGCCTTTCGC TTTGCCGTCT GCGGCGAGAT AGACGAGGCA
GTGCAGCCCA ACGATTTCGG GGTGCATGAA CGGGTAATAC CGGCGGGGCG CTGTGCCGTG
ATTCGACATA CCGGTTCGCC TGACTACATT GGCGAAACTA TCTACCCGCT CTACCGTGAC
TGGCTGCCAT CGAGCAACGA AGAACTGCGT GATCATCCGT TGTTCTTTGA TTACCTGAGC
GTGTATCCGG AAACGCCACT GGAGCAATGG CAGACAGACA TCTACGTGCC GCTGAAATAG
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| Protein sequence | MKRFETVLAY IDSHLEGDLS VNALSRIANF SAFHFHRQFT AYMGVPVSRY VQLMRLRRAA
HQLVASPATP ILEAAFGAGF ESPEAFARAF KRAFGMAPSA FAKAPNWQAW SAVFNVPQRS
RSITMQIRIV NFAETRVAAL EHQGPPGLVS ESVARFRQWR MHSGQSPVAS SRTFGIPYDN
PDTTPAHAFR FAVCGEIDEA VQPNDFGVHE RVIPAGRCAV IRHTGSPDYI GETIYPLYRD
WLPSSNEELR DHPLFFDYLS VYPETPLEQW QTDIYVPLK
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